Parental gene: | MRPL35, ENSPTRG00000012152 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:14489] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 2A:87405706..87419903(+) |
>ENSPTRG00000012152
ATGGCTGCCTCTGCCTTTGCTGGTGCGGTGAGAGCAGCTTCAGGAATCCTACGGCCCCTGAATATTTTGGCATCTTCAAC
CTACCGCAACTGTGTCAAGAATGCCTCTCTTATTTCTGCATTGTCCACTGGACGTTTTAGTCATATTCAGACACCAGTTG
TTTCCTCCACTCCCAGACTTACCACATCTGAGAGAAACCTGACATGTGGGCATACCTCAGCGATCCTTAATAGAGTGGCC
CCCGTGCTTCCAAGTGTCCTGAAGCTGCCAGTCAGATCTCTAACATACTTCAGTGCAAGAAAAGGCAAGAGAAAGACCGT
GAAAGCTGTCATCGATAGGTTTCTTCGACTTCATTGTGGCCTTTGGGTGAGGAGAAAGGCTGGCTATAAGAAGAAATTAT
GGAAAAAGACACCTGCAAGGAAGAAGCGATTGAGGGAATTTGTATTCTGCAATAAAACCCAGAGTAAACTCTTAGATAAA
ATGACGACGTCCTTCTGGAAGAGGCGAAACTGGCACTCCCCCATTTGCAGATGA
ATGGCTGCCTCTGCCTTTGCTGGTGCGGTGAGAGCAGCTTCAGGAATCCTACGGCCCCTGAATATTTTGGCATCTTCAAC
CTACCGCAACTGTGTCAAGAATGCCTCTCTTATTTCTGCATTGTCCACTGGACGTTTTAGTCATATTCAGACACCAGTTG
TTTCCTCCACTCCCAGACTTACCACATCTGAGAGAAACCTGACATGTGGGCATACCTCAGCGATCCTTAATAGAGTGGCC
CCCGTGCTTCCAAGTGTCCTGAAGCTGCCAGTCAGATCTCTAACATACTTCAGTGCAAGAAAAGGCAAGAGAAAGACCGT
GAAAGCTGTCATCGATAGGTTTCTTCGACTTCATTGTGGCCTTTGGGTGAGGAGAAAGGCTGGCTATAAGAAGAAATTAT
GGAAAAAGACACCTGCAAGGAAGAAGCGATTGAGGGAATTTGTATTCTGCAATAAAACCCAGAGTAAACTCTTAGATAAA
ATGACGACGTCCTTCTGGAAGAGGCGAAACTGGCACTCCCCCATTTGCAGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .44 RPM |
| SRP007412_cerebellum | 5 .56 RPM |
| SRP007412_heart | 16 .03 RPM |
| SRP007412_kidney | 9 .94 RPM |
| SRP007412_liver | 5 .30 RPM |
| SRP007412_testis | 2 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019467 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000008329 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000132313 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000026769 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000004773 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000052962 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004048 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000008546 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015366 | ortholog_one2one | 10 retrogenes | |
| Tarsius syrichta | ENSTSYG00000007713 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_438 | 89.02 | 97.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_489 | 80.46 | 97.18 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2325 | 77.54 | 77.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_3185 | 76.88 | 97.74 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000012152 retrocopies