Parental gene: | BOLA3, ENSPTRG00000012078 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 2A:75099761..75112286(-) |
>ENSPTRG00000012078
ATGGCTGCATGGAGCCCGGCCGCGGCAGCGCCTCTCCTCCGCGGGATCCGCGGGCTTCCACTTCACCATCGGATGTTTGC
CACTCAGACTGAGGGGGAGCTCAGAGTGACCCAAATTCTCAAAGAAAAGTTTCCACGAGCTACAGCTATAAAAGTCACTG
ACATTTCAGGAGGTTGTGGGGCGATGTATGAAATTAAAATTGAATCAGAAGAATTTAAGGAGAAGAGAACTGTCCAGCAG
CACCAGATGGTTAATCAGGCACTAAAAGAAGAAATCAAAGAGATGCATGGATTGCGGATATTTACCTCTGTCCCCAAACG
CTGA
ATGGCTGCATGGAGCCCGGCCGCGGCAGCGCCTCTCCTCCGCGGGATCCGCGGGCTTCCACTTCACCATCGGATGTTTGC
CACTCAGACTGAGGGGGAGCTCAGAGTGACCCAAATTCTCAAAGAAAAGTTTCCACGAGCTACAGCTATAAAAGTCACTG
ACATTTCAGGAGGTTGTGGGGCGATGTATGAAATTAAAATTGAATCAGAAGAATTTAAGGAGAAGAGAACTGTCCAGCAG
CACCAGATGGTTAATCAGGCACTAAAAGAAGAAATCAAAGAGATGCATGGATTGCGGATATTTACCTCTGTCCCCAAACG
CTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 9 .69 RPM |
| SRP007412_cerebellum | 6 .95 RPM |
| SRP007412_heart | 17 .75 RPM |
| SRP007412_kidney | 11 .04 RPM |
| SRP007412_liver | 5 .89 RPM |
| SRP007412_testis | 8 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017844 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000163170 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024505 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000015207 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000045160 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000320 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000016658 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012285 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000001754 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1309 | 85.94 | 59.81 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2299 | 91.59 | 99.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2820 | 64.81 | 96.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000012078 retrocopies