Parental gene: | WDR45L, ENSPTRG00000009807 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:82117298..82151213(-) |
>ENSPTRG00000009807
ATGAACCTCCTGCCGTGTAACCCTCACGGCAACGGGCTGCTCTACGCCGGCTTCAACCAGGACCACGGATGCTTTGCGTG
TGGGATGGAAAATGGATTCCGAGTCTATAACACTGATCCACTAAAAGAAAAAGAGAAACAAGAATTTCTAGAAGGAGGAG
TTGGCCATGTTGAAATGTTATTTCGCTGCAACTATTTAGCTTTAGTTGGTGGTGGAAAAAAGCCGAAATACCCTCCCAAC
AAAGTAATGATCTGGGATGACCTGAAGAAGAAGACTGTTATTGAAATAGAATTTTCTACAGAAGTCAAGGCAGTCAAACT
GCGGCGAGATAGAATTGTGGTGGTTTTGGACTCCATGATTAAGGTGTTCACATTCACACACAATCCCCATCAGTTGCACG
TCTTCGAAACCTGCTATAACCCCAAAGGCCTCTGTGTCCTTTGTCCCAATAGTAACAACTCCCTCCTGGCCTTTCCGGGC
ACGCACACGGGCCATGTGCAGCTCGTGGACCTGGCCAGCACGGAGAAGCCACCTGTGGACATTCCTGCACATGAGGGTGT
CCTGAGCTGCATTGCACTCAACCTGCAGGGAACAAGAATTGCAACTGCATCCGAGAAAGGGACGCTTATAAGAATATTTG
ATACTTCATCAGGGCATTTAATCCAGGAACTGCGAAGAGGATCTCAAGCAGCCAATATTTACTGCATCAACTTCAATCAG
GATGCGTCCCTCATCTGCGTATCCAGCGACCACGGCACAGTGCATATTTTTGCAGCTGAAGATCCAAAAAGGAATAAACA
GTCCAGTTTGGCCTCAGCCAGTTTCCTTCCAAAATACTTCAGTTCCAAGTGGAGTTTCTCCAAGTTTCAGGTTCCCTCAG
GCTCTCCGTGCATTTGTGCCTTTGGAACAGAGCCAAACGCCGTCATTGCAATTTGTGCAGACGGCAGCTACTACAAATTC
CTGTTCAACCCCAAGGGGGAGTGCATCCGAGATGTCTACGCGCAGTTTCTAGAGATGACCGATGACAAGCTGTGA
ATGAACCTCCTGCCGTGTAACCCTCACGGCAACGGGCTGCTCTACGCCGGCTTCAACCAGGACCACGGATGCTTTGCGTG
TGGGATGGAAAATGGATTCCGAGTCTATAACACTGATCCACTAAAAGAAAAAGAGAAACAAGAATTTCTAGAAGGAGGAG
TTGGCCATGTTGAAATGTTATTTCGCTGCAACTATTTAGCTTTAGTTGGTGGTGGAAAAAAGCCGAAATACCCTCCCAAC
AAAGTAATGATCTGGGATGACCTGAAGAAGAAGACTGTTATTGAAATAGAATTTTCTACAGAAGTCAAGGCAGTCAAACT
GCGGCGAGATAGAATTGTGGTGGTTTTGGACTCCATGATTAAGGTGTTCACATTCACACACAATCCCCATCAGTTGCACG
TCTTCGAAACCTGCTATAACCCCAAAGGCCTCTGTGTCCTTTGTCCCAATAGTAACAACTCCCTCCTGGCCTTTCCGGGC
ACGCACACGGGCCATGTGCAGCTCGTGGACCTGGCCAGCACGGAGAAGCCACCTGTGGACATTCCTGCACATGAGGGTGT
CCTGAGCTGCATTGCACTCAACCTGCAGGGAACAAGAATTGCAACTGCATCCGAGAAAGGGACGCTTATAAGAATATTTG
ATACTTCATCAGGGCATTTAATCCAGGAACTGCGAAGAGGATCTCAAGCAGCCAATATTTACTGCATCAACTTCAATCAG
GATGCGTCCCTCATCTGCGTATCCAGCGACCACGGCACAGTGCATATTTTTGCAGCTGAAGATCCAAAAAGGAATAAACA
GTCCAGTTTGGCCTCAGCCAGTTTCCTTCCAAAATACTTCAGTTCCAAGTGGAGTTTCTCCAAGTTTCAGGTTCCCTCAG
GCTCTCCGTGCATTTGTGCCTTTGGAACAGAGCCAAACGCCGTCATTGCAATTTGTGCAGACGGCAGCTACTACAAATTC
CTGTTCAACCCCAAGGGGGAGTGCATCCGAGATGTCTACGCGCAGTTTCTAGAGATGACCGATGACAAGCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 75 .52 RPM |
| SRP007412_cerebellum | 130 .92 RPM |
| SRP007412_heart | 43 .25 RPM |
| SRP007412_kidney | 102 .91 RPM |
| SRP007412_liver | 85 .14 RPM |
| SRP007412_testis | 108 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005657 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000141580 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006132 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000013344 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021803 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000025173 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010516 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008785 | ortholog_one2many | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006212 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1171 | 94.48 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1262 | 77.81 | 86.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2912 | 58.45 | 59.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009807 retrocopies