Parental gene: | WDR45L, ENSCPOG00000005657 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_76:7033994..7065016(-) |
>ENSCPOG00000005657
ATGAACCTTCTGCCGTGTAACCCGCACGGCAACGGGCTGCTGTACGCCGGCTTCAACCAGGACCACGGGTGCTTTGCGTG
TGGGATGGAAAATGGATTCCGAGTCTATAACACCGATCCACTCAAAGAAAAAGAGAAACAAGAGTTTTTAGAAGGAGGAG
TTGGCCACGTGGAAATGTTATTTCGCTGCAACTATTTGGCTTTAGTTGGTGGTGGAAAAAAACCAAAATATCCTCCCAAC
AAAGTGATGATCTGGGATGATCTCAAGAAGAAGACGGTTATTGAAATTGAGTTCTCTACGGAGGTCAAGGCGGTGAAGCT
GCGGCGAGACAGAATTGTGGTTGTCTTGGACTCTATGATTAAAGTGTTCACATTCACACACAACCCTCACCAGCTGCATG
TCTTTGAAACCTGCTATAACCCTAAAGGCCTCTGTGTCCTGTGTCCCAATAGTAACAACTCCCTCCTGGCCTTCCCGGGC
ACCCACACGGGCCACGTGCAGCTTGTGGACCTGGCCAGTACCGAGAAGCCCCCTGTGGACATTCCTGCTCATGAGGGAGT
CCTGAGCTGCATCGCTCTCAACCTGCAGGGAACAAGAATTGCAACTGCCTCTGAAAAAGGGACCCTTATAAGAATATTTG
ATACTTCATCAGGGCATTTAATCCAGGAGCTACGAAGAGGATCTCAAGCAGCCAATATCTACTGCATTAACTTCAACCAG
GATGCCTCTCTCATCTGTGTGTCCAGTGACCATGGCACAGTGCACATTTTCGCAGCAGAGGACCCAAAAAGGAATAAGCA
GTCTAGTTTGGCATCAGCCAGCTTTCTTCCAAAATACTTCAGTTCCAAATGGAGTTTCTCCAAGTTCCAGGTCCCCTCAG
GCTCTCCCTGCATTTGTGCCTTTGGGACTGAGCCAAACGCGGTCATTGCCATCTGTGCTGACGGCAGCTACTACAAGTTC
CTGTTCAACCCCAAGGGCGAGTGCATCCGGGATGTGTATGCACAGTTCCTAGAGATGACCGACGACAAGCTGTGA
ATGAACCTTCTGCCGTGTAACCCGCACGGCAACGGGCTGCTGTACGCCGGCTTCAACCAGGACCACGGGTGCTTTGCGTG
TGGGATGGAAAATGGATTCCGAGTCTATAACACCGATCCACTCAAAGAAAAAGAGAAACAAGAGTTTTTAGAAGGAGGAG
TTGGCCACGTGGAAATGTTATTTCGCTGCAACTATTTGGCTTTAGTTGGTGGTGGAAAAAAACCAAAATATCCTCCCAAC
AAAGTGATGATCTGGGATGATCTCAAGAAGAAGACGGTTATTGAAATTGAGTTCTCTACGGAGGTCAAGGCGGTGAAGCT
GCGGCGAGACAGAATTGTGGTTGTCTTGGACTCTATGATTAAAGTGTTCACATTCACACACAACCCTCACCAGCTGCATG
TCTTTGAAACCTGCTATAACCCTAAAGGCCTCTGTGTCCTGTGTCCCAATAGTAACAACTCCCTCCTGGCCTTCCCGGGC
ACCCACACGGGCCACGTGCAGCTTGTGGACCTGGCCAGTACCGAGAAGCCCCCTGTGGACATTCCTGCTCATGAGGGAGT
CCTGAGCTGCATCGCTCTCAACCTGCAGGGAACAAGAATTGCAACTGCCTCTGAAAAAGGGACCCTTATAAGAATATTTG
ATACTTCATCAGGGCATTTAATCCAGGAGCTACGAAGAGGATCTCAAGCAGCCAATATCTACTGCATTAACTTCAACCAG
GATGCCTCTCTCATCTGTGTGTCCAGTGACCATGGCACAGTGCACATTTTCGCAGCAGAGGACCCAAAAAGGAATAAGCA
GTCTAGTTTGGCATCAGCCAGCTTTCTTCCAAAATACTTCAGTTCCAAATGGAGTTTCTCCAAGTTCCAGGTCCCCTCAG
GCTCTCCCTGCATTTGTGCCTTTGGGACTGAGCCAAACGCGGTCATTGCCATCTGTGCTGACGGCAGCTACTACAAGTTC
CTGTTCAACCCCAAGGGCGAGTGCATCCGGGATGTGTATGCACAGTTCCTAGAGATGACCGACGACAAGCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 11 .71 RPM |
| SRP017611_kidney | 18 .74 RPM |
| SRP017611_brain | 26 .29 RPM |
| SRP040447_lung | 29 .91 RPM |
| SRP040447_skeletal_muscle | 8 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000141580 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006132 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000013344 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021803 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000025173 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010516 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008785 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000009807 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006212 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_322 | 60.19 | 58.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000005657 retrocopies