Parental gene: | YBX2, ENSPTRG00000008673 |
| Aliases: | None |
| Description: | Y box binding protein 2 [Source:HGNC Symbol;Acc:17948] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:7348625..7354366(-) |
>ENSPTRG00000008673
ATGAGCGAGGTGGAGGCGGCAGCGGTGGCTACAGCGGTCCCCGCGGCGACGGTGCCCGCGACGGCGGCAGGGGTGGTAGC
GGTGGTGGTACCGGTGCCCGCAGGGGAGCCGCAGAAAGCAGGCGGCGGGGCGGGCGGCGGGGGCGGAGCCGCCTCGGGCC
CCGCTACTGGGACCCCCTCGGCGCCGGGCCCCCGCACCCCTGGCAATCCGGCGACGGCGGCCTCGGGAACCCCCGCCCCC
CCGGCCCGGAGTCAGGCGGACAAGCCGGTGCTGGCAATCCAAGTCCTGGGCACTGTCAAATGGTTCAACGTCCGGAATGG
TTACGGATTCATCAACAGGAATGACACCAAGGAAGATGTCTTTGTTCACCAGACAGCTATTAAAAGAAACAACCCCAGGA
AGTTTCTGCGCAGCGTTGGAGATGGGGAGACTGTGGAATTTGATGTCGTGGAAGGAGAGAAGGGTGCAGAAGCCACTAAT
GTAACTGGGCCCGGGGGAGTACCCGTGAAGGGCAGCCGTTATGCCCCCAACCGACGTAAGTCCCGCCGATTCATCCCCCG
GCCTCCCTCAGTTGCCCCACCACCCATGGTGGCAGAGATCCCCTCGGCGGGGACAGGACCTGGCAGTAAAGGGGAGCGGG
CTGAAGACTCTGGGCAACGGCCCAGACGATGGTGCCCCCCACCCTTCTTCTACCGACGGCGGTTTGTGCGAGGCCCCCGG
CCTCCCAACCAGCAGCAGCCTATAGAGGGCACTGACAGGGTAGAACCCAAAGAGACAGCCCCATTGGAGGGGCACCAACA
GCAGGGAGATGAGCGGGTCCCCCCGCCCAGATTCCGGCCCAGGTACCGAAGGCCTTTCCGCCCCAGGCCACGCCAGCAGC
CTACCACAGAAGGTGGGGATGGTGAGACCAAGCCCAGCCAAGGTCCCGCTGATGGTTCCCGGCCTGAGCCCCAGCGCCCA
CGAAACCGCCCCTACTTCCAGCGGAGACGGCAGCAGGCCCCTGGCCCCCAGCAGGCCCCTGGCCCCCGGCAGCCCGCAGC
CCCTGAGACCTCAGCCCCTGTCAACAGTGGGGACCCCACCACCACCATCCTGGAGTGA
ATGAGCGAGGTGGAGGCGGCAGCGGTGGCTACAGCGGTCCCCGCGGCGACGGTGCCCGCGACGGCGGCAGGGGTGGTAGC
GGTGGTGGTACCGGTGCCCGCAGGGGAGCCGCAGAAAGCAGGCGGCGGGGCGGGCGGCGGGGGCGGAGCCGCCTCGGGCC
CCGCTACTGGGACCCCCTCGGCGCCGGGCCCCCGCACCCCTGGCAATCCGGCGACGGCGGCCTCGGGAACCCCCGCCCCC
CCGGCCCGGAGTCAGGCGGACAAGCCGGTGCTGGCAATCCAAGTCCTGGGCACTGTCAAATGGTTCAACGTCCGGAATGG
TTACGGATTCATCAACAGGAATGACACCAAGGAAGATGTCTTTGTTCACCAGACAGCTATTAAAAGAAACAACCCCAGGA
AGTTTCTGCGCAGCGTTGGAGATGGGGAGACTGTGGAATTTGATGTCGTGGAAGGAGAGAAGGGTGCAGAAGCCACTAAT
GTAACTGGGCCCGGGGGAGTACCCGTGAAGGGCAGCCGTTATGCCCCCAACCGACGTAAGTCCCGCCGATTCATCCCCCG
GCCTCCCTCAGTTGCCCCACCACCCATGGTGGCAGAGATCCCCTCGGCGGGGACAGGACCTGGCAGTAAAGGGGAGCGGG
CTGAAGACTCTGGGCAACGGCCCAGACGATGGTGCCCCCCACCCTTCTTCTACCGACGGCGGTTTGTGCGAGGCCCCCGG
CCTCCCAACCAGCAGCAGCCTATAGAGGGCACTGACAGGGTAGAACCCAAAGAGACAGCCCCATTGGAGGGGCACCAACA
GCAGGGAGATGAGCGGGTCCCCCCGCCCAGATTCCGGCCCAGGTACCGAAGGCCTTTCCGCCCCAGGCCACGCCAGCAGC
CTACCACAGAAGGTGGGGATGGTGAGACCAAGCCCAGCCAAGGTCCCGCTGATGGTTCCCGGCCTGAGCCCCAGCGCCCA
CGAAACCGCCCCTACTTCCAGCGGAGACGGCAGCAGGCCCCTGGCCCCCAGCAGGCCCCTGGCCCCCGGCAGCCCGCAGC
CCCTGAGACCTCAGCCCCTGTCAACAGTGGGGACCCCACCACCACCATCCTGGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .43 RPM |
| SRP007412_cerebellum | 0 .11 RPM |
| SRP007412_heart | 0 .52 RPM |
| SRP007412_kidney | 1 .39 RPM |
| SRP007412_liver | 1 .60 RPM |
| SRP007412_testis | 144 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016581 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000006047 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022712 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008063 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015064 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_50 | 54.79 | 50.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_464 | 83.94 | 51.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1264 | 91.25 | 65.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000008673 retrocopies