Parental gene: | RBM23, ENSPTRG00000006151 |
| Aliases: | None |
| Description: | RNA binding motif protein 23 [Source:HGNC Symbol;Acc:20155] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 14:21799567..21818793(-) |
>ENSPTRG00000006151
ATGGCATCTGATGACTTTGACATAGTGATTGAGGCCATGCTGGAAGCTCCCTATAAAAAAGAAGAGGATGAGCAACAAAG
GAAAGAAGTTAAAAAGGATTATCCTAGCAATACCACCAGCAGCACCAGCAACAGTGGCAATGAGACCAGTGGAAGCAGCA
CCATCGGGGAGACAAGCAAGAAGAAGAGGAGTCGGAGCCATAGTAAAAGCAGGGATAGAAAGCGCAGTCGTAGTCGAGAT
CGGGATCGGTATAGACGGAGAAATAGTCGGAGCCGAAGTCGAGGTCGGCAGCGTCGTCACCGTAGCCGTAGCTGGGATCG
TCGACATAGTAGTGAGTCGCGAAGTCGGGACCATCGTCGTGAGGATCGTGTGCATTACAGGAGTCCTCCACTTGCCACTG
GTTATAGGTATGGACACAGTAAGAGTCCTCATTTCAGAGAGAAGAGCCCAGTCAGGGAGCCAATTGATAATCTGAGTCCT
GAGGAGCGTGATGCCCGCACAGTTTTCTGTATGCAGTTAGCTGCCCGAATTCGGCCTCGAGATCTGGAGGACTTTTTCTC
TGCTGTAGGCAAGGTTCGCGATGTACGTATCATCTCAGATCGGAACTCACGTCGTTCTAAGGGCATTGCCTACGTGGAAT
TCTGTGAAATCCAGTCTGTGCCACTGGCCATTGGGCTGACTGGGCAGCGGTTGCTGGGAGTGCCTATCATTGTACAGGCT
TCACAGGCAGAGAAAAACCGACTGGCAGCCATGGCCAACAACCTGCAAAAGGGCAATGGTGGACCAATGCGCCTCTATGT
GGGTTCCCTGCACTTCAATATCACTGAAGACATGCTCCGGGGCATCTTTGAGCCCTTTGGTAAAATTGATAATATTGTCC
TGATGAAGGACTCAGATACAGGCCACTCTAAAGGTTATGGTTTCATCACGTTCTCTGATTCTGAGTGTGCCCGGCGGGCC
CTGGAACAGTTGAATGGGTTTGAGCTTGCTGGTCGACCTATGAGGGTTGGCCATGTGACTGAGCGACTGGATGGTGGCAC
AGACATCACTTTTCCTGATGGGGACCAGGAGCTGGATCTGGGATCAGCAGGTGGACGTTTTCAGCTCATCGCAAAACTGG
CAGAAGGCGCTGGAATCCAACTGCCAAGCACTGCTACTGCTGCTGCTGCTGCTGCTGCCGCCGCCGCCCAAGCTGCTGCC
TTGCAACTGAATGGAGCAGTTCCCTTGGGGGCCCTGAATCCAGCAGCTCTGACTGCTCTGAGTCCAGCCCTGAACCTTGC
CTCCCAGTGTTTCCAGCTCTCCAGCCTCTTTACCCCCCAGACCATGTAA
ATGGCATCTGATGACTTTGACATAGTGATTGAGGCCATGCTGGAAGCTCCCTATAAAAAAGAAGAGGATGAGCAACAAAG
GAAAGAAGTTAAAAAGGATTATCCTAGCAATACCACCAGCAGCACCAGCAACAGTGGCAATGAGACCAGTGGAAGCAGCA
CCATCGGGGAGACAAGCAAGAAGAAGAGGAGTCGGAGCCATAGTAAAAGCAGGGATAGAAAGCGCAGTCGTAGTCGAGAT
CGGGATCGGTATAGACGGAGAAATAGTCGGAGCCGAAGTCGAGGTCGGCAGCGTCGTCACCGTAGCCGTAGCTGGGATCG
TCGACATAGTAGTGAGTCGCGAAGTCGGGACCATCGTCGTGAGGATCGTGTGCATTACAGGAGTCCTCCACTTGCCACTG
GTTATAGGTATGGACACAGTAAGAGTCCTCATTTCAGAGAGAAGAGCCCAGTCAGGGAGCCAATTGATAATCTGAGTCCT
GAGGAGCGTGATGCCCGCACAGTTTTCTGTATGCAGTTAGCTGCCCGAATTCGGCCTCGAGATCTGGAGGACTTTTTCTC
TGCTGTAGGCAAGGTTCGCGATGTACGTATCATCTCAGATCGGAACTCACGTCGTTCTAAGGGCATTGCCTACGTGGAAT
TCTGTGAAATCCAGTCTGTGCCACTGGCCATTGGGCTGACTGGGCAGCGGTTGCTGGGAGTGCCTATCATTGTACAGGCT
TCACAGGCAGAGAAAAACCGACTGGCAGCCATGGCCAACAACCTGCAAAAGGGCAATGGTGGACCAATGCGCCTCTATGT
GGGTTCCCTGCACTTCAATATCACTGAAGACATGCTCCGGGGCATCTTTGAGCCCTTTGGTAAAATTGATAATATTGTCC
TGATGAAGGACTCAGATACAGGCCACTCTAAAGGTTATGGTTTCATCACGTTCTCTGATTCTGAGTGTGCCCGGCGGGCC
CTGGAACAGTTGAATGGGTTTGAGCTTGCTGGTCGACCTATGAGGGTTGGCCATGTGACTGAGCGACTGGATGGTGGCAC
AGACATCACTTTTCCTGATGGGGACCAGGAGCTGGATCTGGGATCAGCAGGTGGACGTTTTCAGCTCATCGCAAAACTGG
CAGAAGGCGCTGGAATCCAACTGCCAAGCACTGCTACTGCTGCTGCTGCTGCTGCTGCCGCCGCCGCCCAAGCTGCTGCC
TTGCAACTGAATGGAGCAGTTCCCTTGGGGGCCCTGAATCCAGCAGCTCTGACTGCTCTGAGTCCAGCCCTGAACCTTGC
CTCCCAGTGTTTCCAGCTCTCCAGCCTCTTTACCCCCCAGACCATGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 45 .38 RPM |
| SRP007412_cerebellum | 60 .80 RPM |
| SRP007412_heart | 16 .03 RPM |
| SRP007412_kidney | 68 .81 RPM |
| SRP007412_liver | 30 .15 RPM |
| SRP007412_testis | 39 .73 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000008482 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012923 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000001092 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000010354 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_3108 | 68.00 | 61.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000006151 retrocopies