Parental gene: | RBM23, ENSOPRG00000001092 |
| Aliases: | None |
| Description: | RNA binding motif protein 23 [Source:HGNC Symbol;Acc:20155] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_1890:357433..364538(-) |
>ENSOPRG00000001092
ATGGCGTCTGATGACTTTGATATAGTGATTGAGGCCATGCTGGAAGCTCCCTATAAAAAAGAGGAGGATGAGCAGCAAAG
GAAAGAGGTTAAAAAGGACAGTCCTAGCAATACCACCATCAGCACCGGCACCAGTGGCAGTGGTACCAGTGGGAGCACCA
CCACTGGGGAGACGAGCAAAAGGAAGAGAAGTCGGAGCTGTAGTAGAAGCAGGGATAGAAAACGCAGTCGCAGCCGAGAC
CGGGATCGGCATAGAAGGAGAAATAGTCGGAGCCGAAGCCGAGATCGCCAGCATCGTCACCGTAGCCGTAGCAGGGACCG
TCGACACAGTAGTGAGTCACGAAGTCGCGACCGGCGTCGTGAGGATCGTGTGCGCTATAGGAGTTCTCCACTTGCTGCTG
GGCCTAGATATGGACAGAATAAGAGTCCTCACATCAGAGAGAAGAGCCCGGTCAGGCAGCCAGTGGATAACCTGAGCCCC
GAGGAGCGTGATGCCCGTACGGTTCTCTGCATGCAGCTGGCTGCCCGTATTCGGCCTCGAGACCTGGAGGAGTTTTTCTC
TGCCGTTGGCAAGGTTCGTGACGTGCGGATCATCTCAGATCGGAACTCACGTCGTTCAAAGGGCATTGCCTACGTGGAAT
TCTGTGACATCCAGGCTGTGCCACTGGCCATTGGACTAACTGGGCAACGGCTCCTGGGAGTTCCTATTGTGGTCCAGGCT
TCACAGGCTGAGAAAAATCGACTGGCAGCCGCAGCCAACAGCCTGCAGAAGGGTGGTGGTGGACCAATACGCCTCTATGT
GGGCTCCCTGCACTGCAATATCACTGAGGACATGCTCCGGGGCATCTTTGAGCCCTTTGGCAAAATCGATAATATTGTTC
TGATGAAGGAGTCAGATACAGGTCGATCTAAAGGTTATGGTTTCATTACGTTCTCAGATTCTGAGTGTGGCCGGCGGGCC
CTGGAACAGTTGAATGGCTTTGAGCTTGCTGGTCGACCTATGAGGGTTGGCCATGTGACAGAACGACCAGATGGCACCAC
AGACATCACTTTTCCTGATGGAGACCAGGAACTGGATCTGGGTTCATCAGGTGGACGTTTGCAGCTCATGACCAAACTAG
CAGAAGGCGCTGGACTCCAACTGCCAACCCCAGCGGCTGCTGCTGCTGCTGCCCAAGCTGCTGCCTTGCAACTGAATGGA
GCAGTCCCCCTGGGAACCCTGAACCCGGCGGCTCTAACTGCTCTGAGTCCAGCTCTGAACCTTGCTTCCCAGGCCATCGC
CTCCCAGTGCTTACAGCTCTCAAGCCTCTTCACCCCACAGACCATGTAA
ATGGCGTCTGATGACTTTGATATAGTGATTGAGGCCATGCTGGAAGCTCCCTATAAAAAAGAGGAGGATGAGCAGCAAAG
GAAAGAGGTTAAAAAGGACAGTCCTAGCAATACCACCATCAGCACCGGCACCAGTGGCAGTGGTACCAGTGGGAGCACCA
CCACTGGGGAGACGAGCAAAAGGAAGAGAAGTCGGAGCTGTAGTAGAAGCAGGGATAGAAAACGCAGTCGCAGCCGAGAC
CGGGATCGGCATAGAAGGAGAAATAGTCGGAGCCGAAGCCGAGATCGCCAGCATCGTCACCGTAGCCGTAGCAGGGACCG
TCGACACAGTAGTGAGTCACGAAGTCGCGACCGGCGTCGTGAGGATCGTGTGCGCTATAGGAGTTCTCCACTTGCTGCTG
GGCCTAGATATGGACAGAATAAGAGTCCTCACATCAGAGAGAAGAGCCCGGTCAGGCAGCCAGTGGATAACCTGAGCCCC
GAGGAGCGTGATGCCCGTACGGTTCTCTGCATGCAGCTGGCTGCCCGTATTCGGCCTCGAGACCTGGAGGAGTTTTTCTC
TGCCGTTGGCAAGGTTCGTGACGTGCGGATCATCTCAGATCGGAACTCACGTCGTTCAAAGGGCATTGCCTACGTGGAAT
TCTGTGACATCCAGGCTGTGCCACTGGCCATTGGACTAACTGGGCAACGGCTCCTGGGAGTTCCTATTGTGGTCCAGGCT
TCACAGGCTGAGAAAAATCGACTGGCAGCCGCAGCCAACAGCCTGCAGAAGGGTGGTGGTGGACCAATACGCCTCTATGT
GGGCTCCCTGCACTGCAATATCACTGAGGACATGCTCCGGGGCATCTTTGAGCCCTTTGGCAAAATCGATAATATTGTTC
TGATGAAGGAGTCAGATACAGGTCGATCTAAAGGTTATGGTTTCATTACGTTCTCAGATTCTGAGTGTGGCCGGCGGGCC
CTGGAACAGTTGAATGGCTTTGAGCTTGCTGGTCGACCTATGAGGGTTGGCCATGTGACAGAACGACCAGATGGCACCAC
AGACATCACTTTTCCTGATGGAGACCAGGAACTGGATCTGGGTTCATCAGGTGGACGTTTGCAGCTCATGACCAAACTAG
CAGAAGGCGCTGGACTCCAACTGCCAACCCCAGCGGCTGCTGCTGCTGCTGCCCAAGCTGCTGCCTTGCAACTGAATGGA
GCAGTCCCCCTGGGAACCCTGAACCCGGCGGCTCTAACTGCTCTGAGTCCAGCTCTGAACCTTGCTTCCCAGGCCATCGC
CTCCCAGTGCTTACAGCTCTCAAGCCTCTTCACCCCACAGACCATGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000008482 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012923 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000002183 | within_species_paralog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000006151 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010354 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_126 | 58.84 | 65.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_412 | 58.84 | 65.16 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000001092 retrocopies