Parental gene:

FDX1, ENSPTRG00000004260

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:108313900..108344673(+)


>ENSPTRG00000004260
ATGGCTGCCGCTGGGGGCGCCCGGCTGCTGCGCGCCGCTTCTGCTGTCCTCGGCGGCCCGGGCGGCCGGTGGCTGCACCA
CGCTGGGTCCCGCGCTGGATCCAGCGGCCTGCTGAGGAACCGGGGACCGGGCGGGAGCGCGGAGGCGAGCCGGTCGCTGA
GCGTGTCGGCGCGGGCCCGGAGCAGCTCAGAAGATAAAATAACAGTCCACTTTATAAACCGTGATGGTGAAACATTAACA
ACCAAAGGAAAAGTTGGTGATTCTCTGCTAGATGTTGTGGTTGAAAATAATCTAGATATTGATGGCTTTGGTGCATGTGA
GGGAACCCTGGCTTGTTCAACCTGTCACCTCATCTTTGAAGATCACATATATGAGAAGTTAGATGCAATCACTGATGAGG
AGAATGACATGCTCGATCTGGCATATGGACTAACAGACAGATCACGGTTGGGCTGCCAAATCTGTTTGACAAAATCTATG
GACAATATGACTGTTCGAGTGCCTGAAACAGTGGCCGATGCCAGACAATCCATTGATGTGGGCAAGACCTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .02 RPM
SRP007412_cerebellum 7 .64 RPM
SRP007412_heart 24 .31 RPM
SRP007412_kidney 41 .19 RPM
SRP007412_liver 38 .50 RPM
SRP007412_testis 12 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010395 ortholog_one2one 1 retrogene
retro_cjac_2028,
Homo sapiens ENSG00000137714 ortholog_one2one 2 retrogenes
retro_hsap_2472, retro_hsap_2501,
Gorilla gorilla ENSGGOG00000022443 ortholog_one2many 1 retrogene
retro_ggor_1560,
Nomascus leucogenys ENSNLEG00000007249 ortholog_one2one 1 retrogene
retro_nleu_1432,
Oryctolagus cuniculus ENSOCUG00000017826 ortholog_one2one 1 retrogene
retro_ocun_1907,
Pongo abelii ENSPPYG00000003853 ortholog_one2one 2 retrogenes
retro_pabe_1822, retro_pabe_1841,
Pan troglodytes ENSPTRG00000010465 within_species_paralog 1 retrogene
retro_ptro_267,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1428 91.35 100.00
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2. retro_ptro_1452 72.07 59.78
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Download FASTA sequences of all ENSPTRG00000004260 retrocopies