Parental gene:

MRPL49, ENSPTRG00000003867

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:63061712..63066832(+)


>ENSPTRG00000003867
ATGGCAGCTACCATGTTCCGGGCTACGCTGCGGGGATGGAGAACCGGTGTCCAGCGGGGCTGCGGGCTACGGCTGTTGAG
CCAGACCCAGGGCCCTCCAGATTACCCCAGGTTTGTGGAGTCTGTGGATGAATATCAGTTTGTGGAGCGCCTGTTACCGG
CTACCAGGATCCCAGATCCCCCAAAGCATGAACATTATCCTACCCCTAGTGGCTGGCAGCCTCCCAGAGACCCCCCACCC
AACCTGCCTTACTTTGTACGACGTTCTCGGATGCACAACATCCCCGTCTACAAGGACATCACGCATAGCAACCGGCAGAT
GACTGTGATCCGGAAAGTGGAAGGGGACATCTGGGCCCTGCAGAAAGATGTGGAAGATTTTCTGAGCCCGCTGCTGGGGA
AGACACCCGTCACCCAGGTCAATGAGGTGACAGGTACCCTACGGATCAAGGGCTACTTTGACCAGGAGCTTAAAGCCTGG
CTCTTGGAGAAAGGCTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 34 .32 RPM
SRP007412_cerebellum 28 .71 RPM
SRP007412_heart 22 .03 RPM
SRP007412_kidney 59 .05 RPM
SRP007412_liver 27 .07 RPM
SRP007412_testis 9 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012855 ortholog_one2one 1 retrogene
retro_chof_1006,
Dasypus novemcinctus ENSDNOG00000004494 ortholog_one2one 6 retrogenes
retro_dnov_1396, retro_dnov_1488, retro_dnov_1941, retro_dnov_2272, retro_dnov_2473, retro_dnov_2686,
Dipodomys ordii ENSDORG00000003613 ortholog_one2one 1 retrogene
retro_dord_196,
Homo sapiens ENSG00000149792 ortholog_one2one 1 retrogene
retro_hsap_3180,
Macropus eugenii ENSMEUG00000009437 ortholog_one2one 1 retrogene
retro_meug_1151,
Microcebus murinus ENSMICG00000016604 ortholog_one2one 1 retrogene
retro_mmur_629,
Macaca mulatta ENSMMUG00000018778 ortholog_one2one 1 retrogene
retro_mmul_2031,
Nomascus leucogenys ENSNLEG00000005505 ortholog_one2one 1 retrogene
retro_nleu_1659,
Oryctolagus cuniculus ENSOCUG00000014882 ortholog_one2one 1 retrogene
retro_ocun_316,
Tupaia belangeri ENSTBEG00000007929 ortholog_one2one 2 retrogenes
retro_tbel_1350, retro_tbel_3334,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2263 72.63 54.82
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Download FASTA sequences of all ENSPTRG00000003867 retrocopies