Parental gene: | EIF3F, ENSPTRG00000003326 |
| Aliases: | EIF3F, EIF3S5 |
| Description: | Pan troglodytes eukaryotic translation initiation factor 3, subunit F (EIF3F), mRNA. [Source:RefSeq mRNA;Acc:NM_001110812] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 11:7776463..7785484(+) |
>ENSPTRG00000003326
ATGGCCACACCGGCGGTACCAGTAAGTGCTCCTCCGGCCACGCCAGCCCCAGTCCCGGCGGCGGCCCCAGCCTCGGCCCC
AGCCTCAGTTCCAGCGCCAACGCCAGCACCGGCTGCGGCTCCGGTTCCCGCTGCGGCTCCAGCCTCATCCTCAGACCCTG
CGGCAGCAGCGGCTACAACTGCGGCTCCTGGCCAGACCCCGGCCTCAGCGCAAGCTCCAGCGCAGACCCCAGCGCCCGCT
CTGCCTGGTCCTGCTCTTCCAGGGCCCTTCCCCGGCGGCCGCGTGGTCAGGCTGCACCCAGTCATTTTGGCCTCCATTGT
GGACAGCTACGAGAGACGCAACGAGGGTGCTGCCCGAGTTATCGGGACCCTGTTGGGAACTGTCGACAAACACTCAGTGG
AGGTCACCAATTGCTTTTCAGTGCCGCACAATGAGTCAGAAGATGAAGTGGCTGTTGACATGGAATTTGCTAAGAATATG
TATGAACTGCATAAAAAAGTTTCTCCAAATGAGCTCATCCTGGGCTGGTACGCTACAGGCCATGACATCACAGAGCACTC
TGTGCTGATCCATGAGTACTACAGCCGAGAGGCCCCCAACCCCATCCACCTCACTGTGGACACAAGTCTCCAGAACGGCC
GCATGAGCATCAAAGCCTATGTCAGCACTTTAATGGGTGTCCCTGGGAGGACCATGGGAGTGATGTTCACACCTCTGACA
GTGAAATACGCATACTATGACACTGAACGCATCGGAGTTGACCTGATCATGAAGACCTGCTTTAGCCCCAACAGAGTGAT
TGGACTCTCAAGTGACTTGCAGCAAGTTGGAGGGGCATCAGCTCGCATCCAGGATGCCCTGAGTACAGTGTTGCAATATG
CAGAGGATGTACTGTCTGGAAAGGTGTCAGCTGACAATACTGTGGGCCGCTTCCTGATGAGCCTGGTTAACCAAGTACCG
AAAATAGTTCCCGATGACTTTGAGACCATGCTCAACAGCAACATCAATGACCTTTTGATGGTGACCTACCTGGCCAACCT
CACACAGTCACAGATTGCCCTCAATGAAAAACTTGTAAACCTGTGA
ATGGCCACACCGGCGGTACCAGTAAGTGCTCCTCCGGCCACGCCAGCCCCAGTCCCGGCGGCGGCCCCAGCCTCGGCCCC
AGCCTCAGTTCCAGCGCCAACGCCAGCACCGGCTGCGGCTCCGGTTCCCGCTGCGGCTCCAGCCTCATCCTCAGACCCTG
CGGCAGCAGCGGCTACAACTGCGGCTCCTGGCCAGACCCCGGCCTCAGCGCAAGCTCCAGCGCAGACCCCAGCGCCCGCT
CTGCCTGGTCCTGCTCTTCCAGGGCCCTTCCCCGGCGGCCGCGTGGTCAGGCTGCACCCAGTCATTTTGGCCTCCATTGT
GGACAGCTACGAGAGACGCAACGAGGGTGCTGCCCGAGTTATCGGGACCCTGTTGGGAACTGTCGACAAACACTCAGTGG
AGGTCACCAATTGCTTTTCAGTGCCGCACAATGAGTCAGAAGATGAAGTGGCTGTTGACATGGAATTTGCTAAGAATATG
TATGAACTGCATAAAAAAGTTTCTCCAAATGAGCTCATCCTGGGCTGGTACGCTACAGGCCATGACATCACAGAGCACTC
TGTGCTGATCCATGAGTACTACAGCCGAGAGGCCCCCAACCCCATCCACCTCACTGTGGACACAAGTCTCCAGAACGGCC
GCATGAGCATCAAAGCCTATGTCAGCACTTTAATGGGTGTCCCTGGGAGGACCATGGGAGTGATGTTCACACCTCTGACA
GTGAAATACGCATACTATGACACTGAACGCATCGGAGTTGACCTGATCATGAAGACCTGCTTTAGCCCCAACAGAGTGAT
TGGACTCTCAAGTGACTTGCAGCAAGTTGGAGGGGCATCAGCTCGCATCCAGGATGCCCTGAGTACAGTGTTGCAATATG
CAGAGGATGTACTGTCTGGAAAGGTGTCAGCTGACAATACTGTGGGCCGCTTCCTGATGAGCCTGGTTAACCAAGTACCG
AAAATAGTTCCCGATGACTTTGAGACCATGCTCAACAGCAACATCAATGACCTTTTGATGGTGACCTACCTGGCCAACCT
CACACAGTCACAGATTGCCCTCAATGAAAAACTTGTAAACCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 63 .31 RPM |
| SRP007412_cerebellum | 63 .74 RPM |
| SRP007412_heart | 52 .29 RPM |
| SRP007412_kidney | 134 .68 RPM |
| SRP007412_liver | 65 .86 RPM |
| SRP007412_testis | 68 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000004861 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011903 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002717 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000175390 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011702 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000825 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003220 | possible_ortholog | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000008343 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_197 | 83.33 | 53.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000003326 retrocopies