Parental gene: | TRNT1, ENSPPYG00000013702 |
| Aliases: | None |
| Description: | tRNA nucleotidyl transferase, CCA-adding, 1 [Source:HGNC Symbol;Acc:17341] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:66941317..66962626(-) |
>ENSPPYG00000013702
ATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGTGCTGAACTGTAGGTGGAGTAGGCTGTGCCTTCTGAAGCGGTATCT
ATTTACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGATTGAAGAGTCTGACAGAATTATTTGTCA
AAGAGAATCACGAATTAAGAATAGCAGGAGGAGCAGTGAGGGATTTATTAAATGGAGTAAAGCCTCAGGATATAGATTTT
GCCACCACTGCTACCCCTACTCAAATGAAGGAGATGTTTCAGTCGGCTGGGATTCGGATGATAAACAACAGAGGAGAAAA
GCATGGAACAATTACTGCCAGGCTTCATGAAGAAAATTTTGAGATTACTACACTACGGATTGATGTCACCACTGATGGAA
GACATGCTGAGGTAGAATTTACAACTGACTGGCAGAAAGATGCGGAACGCAGAGATCTCACTATAAATTCTATGTTTTTA
GGTTTTGATGGCACTTTATTTGACTACTTTAATGGTTATGAAGATTTAAAAAATAAGAAAGTTAGATTTGTTGGACATGC
TAAACAGAGAATACAAGAGGATTATCTTAGAATTTTAAGATACTTCAGGTTTTATGGGAGAATTGTAGACAAACCTGGTG
ACCATGATCCTGAAACTTTGGAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGAATATCAGGAGAAAGGATTTGGGTG
GAACTGAAAAAAATTCTTGTTGGTAACCATGTAAATCATTTGATTCACCTTATCTATGATCTTGATGTGGCTCCTTATAT
AGGTTTACCTGCTAATGCAAGTTTAGAAGAATTTGACAAAGTCAGTAAAAATGTTGAAGGTTTTTCACCAAAGCCAATGA
CTCTTTTGGCCTCATTATTCAAAGTACAAGATGATGTCACAAAATTGGATTTGAGGTTGAAGATCGCAAAAGAAGAGAAA
AACCTTGGCTTATTTATAGTTAAAAATAAGAAAGATTTAATTAAAGCAACAGATAGTTCAGAACCATTGAAACCCTATCA
AGACTTCATTATAGATTCTAGGGAACCTGATGCACCTACTCGTGTATGTGAACTACTGAAGTACCAAGGAGAGCACTGTC
TCCTAAAGGAAATGCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCA
GGAAAAGAAATTGGGGCTCTATTACAACAGTTGCGAGAACAGTGGAAAAAAAGTGGTTACCAAATGGAAAAAGATGAACT
TCTGAGTTACATAAAGAAGACCTAA
ATGCTGAGGTGCCTGTATCATTGGCACAGGCCAGTGCTGAACTGTAGGTGGAGTAGGCTGTGCCTTCTGAAGCGGTATCT
ATTTACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCACAGAAGGATTGAAGAGTCTGACAGAATTATTTGTCA
AAGAGAATCACGAATTAAGAATAGCAGGAGGAGCAGTGAGGGATTTATTAAATGGAGTAAAGCCTCAGGATATAGATTTT
GCCACCACTGCTACCCCTACTCAAATGAAGGAGATGTTTCAGTCGGCTGGGATTCGGATGATAAACAACAGAGGAGAAAA
GCATGGAACAATTACTGCCAGGCTTCATGAAGAAAATTTTGAGATTACTACACTACGGATTGATGTCACCACTGATGGAA
GACATGCTGAGGTAGAATTTACAACTGACTGGCAGAAAGATGCGGAACGCAGAGATCTCACTATAAATTCTATGTTTTTA
GGTTTTGATGGCACTTTATTTGACTACTTTAATGGTTATGAAGATTTAAAAAATAAGAAAGTTAGATTTGTTGGACATGC
TAAACAGAGAATACAAGAGGATTATCTTAGAATTTTAAGATACTTCAGGTTTTATGGGAGAATTGTAGACAAACCTGGTG
ACCATGATCCTGAAACTTTGGAAGCAATTGCAGAAAATGCAAAAGGCTTGGCTGGAATATCAGGAGAAAGGATTTGGGTG
GAACTGAAAAAAATTCTTGTTGGTAACCATGTAAATCATTTGATTCACCTTATCTATGATCTTGATGTGGCTCCTTATAT
AGGTTTACCTGCTAATGCAAGTTTAGAAGAATTTGACAAAGTCAGTAAAAATGTTGAAGGTTTTTCACCAAAGCCAATGA
CTCTTTTGGCCTCATTATTCAAAGTACAAGATGATGTCACAAAATTGGATTTGAGGTTGAAGATCGCAAAAGAAGAGAAA
AACCTTGGCTTATTTATAGTTAAAAATAAGAAAGATTTAATTAAAGCAACAGATAGTTCAGAACCATTGAAACCCTATCA
AGACTTCATTATAGATTCTAGGGAACCTGATGCACCTACTCGTGTATGTGAACTACTGAAGTACCAAGGAGAGCACTGTC
TCCTAAAGGAAATGCAGCAGTGGTCCATTCCTCCATTTCCTGTAAGTGGCCATGACATCAGAAAAGTGGGCATTTCTTCA
GGAAAAGAAATTGGGGCTCTATTACAACAGTTGCGAGAACAGTGGAAAAAAAGTGGTTACCAAATGGAAAAAGATGAACT
TCTGAGTTACATAAAGAAGACCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .92 RPM |
| SRP007412_cerebellum | 5 .11 RPM |
| SRP007412_heart | 2 .20 RPM |
| SRP007412_kidney | 5 .67 RPM |
| SRP007412_liver | 2 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015466 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000008837 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000018177 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000072756 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015286 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003226 | ortholog_one2one | 1 retrogene | |
| Petromyzon marinus | ENSPMAG00000002236 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014564 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_412 | 76.13 | 50.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1916 | 70.56 | 55.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2721 | 97.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000013702 retrocopies