Parental gene: | ENSPPYG00000011492 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 21:46108405..46120178(-) |
>ENSPPYG00000011492
ACGTCCGTCTGCTCCAGCAACCTGAGCTACGGCAGCCGCGTCTGCCTTGCTGGTTCCTGTGACTCTTACTCTGACTCCTG
GCAGGTGGACGACTGCCCAGAGAGCTGCTGTGAGCCCCCCTGCTGCACCCCCAGCTGCTGCGCCCCGGCCCCCTGCCTGA
CCCTGGTCTGCACCCCAGTGAGCTGTGTGTCCAGCCCCTGCTGCCAGGCGACCTGTGAGCCCAGCCCCCAATCAGGCTGC
ACCAGCTCCTGCACACCCTCATGCTGCCAGCAGTCTAGCTGCCAGCAGGCTTGCTGTACCTCCTCCCCCTGCCAGCAGTC
CTGCTGCGTGCCTGTCTGCTGCAAGCCTGTCTGCTGCGTGCCTGTCTGCTGCAAGCCTGTGTGCTGCGTGCCCATCTGCT
CTGAGGATTCCTCTTCATGCTGCCAGCAGTCTAGCTGCCAGCCAGCTTGCTGTGCCTCTTCCTCCTGCCAGCAGTCCTGC
TGTGTGCCTGTTTGCTGCAAGCCCGTGTGCTATGTGCCCAGCTGTTCTGAGGATTCCTCTTCATGCTGTCAGCAGTCTAG
CTGCCAGCCAGCTTGCTGCACCTCCTCCCCCTGCCAGCACACCTGCTGTGTGCCCGCCTGCTGCGTGCCCATCTGCTGCA
AGCCTGTGTGCTGTGTGCCTACCTGCTCTAAGGATTCCTCTTCATGCTGCCAGCAGTCTAGCTGCCAGCCAACTTGCTGT
GCCTCTTCCTCCTGCCAGCAGTCCTGCTGTGTGCCTGTCTGCTGCAAGCCCGTGTGCTGTGTGCCCGTCTGCTCTGGGGC
TTCCACTTCATGCTGCCAGCAGTCTAGCTGCCAACCGGCTTGCTACACCACCTCCTGCTGCAGACCCTCCTCCTCTGTGT
CCCTCCTCTGCCGCCCCATATGCAGGCCCGCCTGCTGCATGCCCGTCTCCTCCTGCTGTGCCCATGCCTCCTCCTGCCAG
GCTAGCTGCTGCCGCCCGGCCTCCTGTGTGTCCCTCCTC
ACGTCCGTCTGCTCCAGCAACCTGAGCTACGGCAGCCGCGTCTGCCTTGCTGGTTCCTGTGACTCTTACTCTGACTCCTG
GCAGGTGGACGACTGCCCAGAGAGCTGCTGTGAGCCCCCCTGCTGCACCCCCAGCTGCTGCGCCCCGGCCCCCTGCCTGA
CCCTGGTCTGCACCCCAGTGAGCTGTGTGTCCAGCCCCTGCTGCCAGGCGACCTGTGAGCCCAGCCCCCAATCAGGCTGC
ACCAGCTCCTGCACACCCTCATGCTGCCAGCAGTCTAGCTGCCAGCAGGCTTGCTGTACCTCCTCCCCCTGCCAGCAGTC
CTGCTGCGTGCCTGTCTGCTGCAAGCCTGTCTGCTGCGTGCCTGTCTGCTGCAAGCCTGTGTGCTGCGTGCCCATCTGCT
CTGAGGATTCCTCTTCATGCTGCCAGCAGTCTAGCTGCCAGCCAGCTTGCTGTGCCTCTTCCTCCTGCCAGCAGTCCTGC
TGTGTGCCTGTTTGCTGCAAGCCCGTGTGCTATGTGCCCAGCTGTTCTGAGGATTCCTCTTCATGCTGTCAGCAGTCTAG
CTGCCAGCCAGCTTGCTGCACCTCCTCCCCCTGCCAGCACACCTGCTGTGTGCCCGCCTGCTGCGTGCCCATCTGCTGCA
AGCCTGTGTGCTGTGTGCCTACCTGCTCTAAGGATTCCTCTTCATGCTGCCAGCAGTCTAGCTGCCAGCCAACTTGCTGT
GCCTCTTCCTCCTGCCAGCAGTCCTGCTGTGTGCCTGTCTGCTGCAAGCCCGTGTGCTGTGTGCCCGTCTGCTCTGGGGC
TTCCACTTCATGCTGCCAGCAGTCTAGCTGCCAACCGGCTTGCTACACCACCTCCTGCTGCAGACCCTCCTCCTCTGTGT
CCCTCCTCTGCCGCCCCATATGCAGGCCCGCCTGCTGCATGCCCGTCTCCTCCTGCTGTGCCCATGCCTCCTCCTGCCAG
GCTAGCTGCTGCCGCCCGGCCTCCTGTGTGTCCCTCCTC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .03 RPM |
| SRP007412_kidney | 0 .07 RPM |
| SRP007412_liver | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008415 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001218 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_14 | 72.97 | 77.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_15 | 56.89 | 98.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_16 | 70.69 | 69.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000011492 retrocopies