Parental gene:

SLC35C2, ENSPPYG00000011091

Aliases:None
Description:solute carrier family 35 (GDP-fucose transporter), member C2 [Source:HGNC Symbol;Acc:17117]
Organism:Orangutan (Pongo abelii)
Coordinates:20:43933993..43943488(-)


>ENSPPYG00000011091
ATGGGGAGGTGGGCCCTCGATGTGGCTTTTGTGTGGAAGGCGGTGTTGACCCTGGGGCTGGTGCTTCTCTACTACTGCTT
CTCCATCGGCATCACTTTCTACAACAAATGGCTGACAAAGAGGGCGCTGGTTCAGTGCTCCAGCCACAGGGCCCGTGTGG
TGCTGAGCTGGGCCGACTACCTCAGAAGAGTGGCTCCCACAGCTCTGGCGACAGCGCTTGACGTGGGCTTGTCCAACTGG
AGCTTCCTCTATGTCACCGTCTCGCTGTACACAATGACCAAATCCTCAGCTGTCCTCTTCATCTTGATCTTCTCTCTGAT
CTTCAAGCTGGAGGAGCTGCGTGCGGCACTGGTCCTGGTGGTCCTCCTCATCGCCGGTGGTCTCTTCATGTTCACCTACA
AGTCCACACAGTTCAACATGGAGGGTTTCGCCTTGGTGCTGGGGGCCTCGTTCATCGGTGGCATTCGCTGGACCCTCACC
CAGATGCTCCTGCAGAAGGCTGAACTTGGCCTCCAGAATCCCATCGACACCATGTTCCACCTGCAGCCACTCATGTTCCT
GGGGCTTTTCCCTCTCTTTGCTATATTTGAAGGTCTCCATTTGTCCACATCTGAGAAAATCTTCCGTTTCCAGGACACAG
GGCTGCTCCTGCGGGTACTTGGGAGCCTCTTCCTTGGCGGGATTCTCGCCTTTGGTTTGGGCTTCTCTGAGTTCCTCCTG
GTCTCCAGAACCTCCAGCCTCACTCTCTCCATTGCTGGCATTTTTAAGGAAGTCTGCACTTTGCTGTTGGCAGCTCATCT
GCTGGGCGATCAGATCAGCCTCCTGAACTGGCTGGGCTTCGCCCTCTGCCTCTCGGGAATATCCCTCCATGTTGCCCTCA
AAGCCCTGCATTCCAGAGGTGATGGTGGCCCCAAGGCCTTGAAGGGGCTGGGCTCCAGCCCCGACCTGGAGCTGCTGCTC
CGGAGCAGCCAGCGGGAGGAAGGTGACAATGAGGAGGAGGAGTACTTTGTGGCCCAGGGGCAGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 22 .17 RPM
SRP007412_cerebellum 27 .00 RPM
SRP007412_heart 7 .01 RPM
SRP007412_kidney 27 .98 RPM
SRP007412_liver 17 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011583 ortholog_one2one 2 retrogenes
retro_chof_2686, retro_chof_952,
Callithrix jacchus ENSCJAG00000017091 ortholog_one2one 1 retrogene
retro_cjac_4140,
Homo sapiens ENSG00000080189 ortholog_one2one 1 retrogene
retro_hsap_4789,
Gorilla gorilla ENSGGOG00000014052 ortholog_one2one 1 retrogene
retro_ggor_2982,
Nomascus leucogenys ENSNLEG00000006880 ortholog_one2one 1 retrogene
retro_nleu_1104,
Pan troglodytes ENSPTRG00000013582 ortholog_one2one 1 retrogene
retro_ptro_3186,
Tupaia belangeri ENSTBEG00000005486 ortholog_one2one 1 retrogene
retro_tbel_531,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3726 74.75 58.19
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Download FASTA sequences of all ENSPPYG00000011091 retrocopies