Parental gene: | RPS9, ENSPPYG00000010377 |
| Aliases: | None |
| Description: | ribosomal protein S9 [Source:HGNC Symbol;Acc:10442] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 19:55986201..55992617(+) |
>ENSPPYG00000010377
ATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCA
AGAGCTGAAGCTGATCGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCC
GCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGCAACGCCCTGCTGCGGCGG
CTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGA
GAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCC
ACATCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCT
CTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGC
TGGAGACGACGAGGAGGAGGATTAA
ATGCCGGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCA
AGAGCTGAAGCTGATCGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCC
GCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGCAACGCCCTGCTGCGGCGG
CTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGA
GAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCC
ACATCAGGGTCCGCAAGCAGGTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCT
CTGCGCTCTCCCTATGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAACGCCAAGAAGGGCCAGGGTGGGGCTGGGGC
TGGAGACGACGAGGAGGAGGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 155 .37 RPM |
| SRP007412_cerebellum | 63 .96 RPM |
| SRP007412_heart | 134 .53 RPM |
| SRP007412_kidney | 412 .68 RPM |
| SRP007412_liver | 293 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000022552 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000010394 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006314 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000011355 | possible_ortholog | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049813 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1343 | 92.75 | 96.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1701 | 95.41 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1845 | 80.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1887 | 93.85 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2671 | 60.67 | 91.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000010377 retrocopies