Parental gene:

TRAPPC6A, ENSPPYG00000010109

Aliases:None
Description:trafficking protein particle complex 6A [Source:HGNC Symbol;Acc:23069]
Organism:Orangutan (Pongo abelii)
Coordinates:19:46411585..46426968(-)


>ENSPPYG00000010109
ATGGCGGATACTGTGTTGTTTGAGTTTCTTCACACGGAGATGGTGGCTGAGCTGTGGGCTCACGACCCCGGCCCGGGGGT
GAGCGCCGGGCTCCGTGGGGAGGAAGCGGGGGCCACCAAGGGACAGAAGATGAGCCTGTCGGTCCTGGAGGGTATGGGGT
TCCGTGTGGGCCAGGCTCTAGGCGAGAGGCTGCCCCGAGAGATGCTGGCCTTCAGGGAGGAGCTCGATGTCCTGAAGTTC
TTGTGCAAAGACCTGTGGGTGGCTGTGTTCCAGAAGCAGATGGACAGCCTGCGCACCAATCACCAGGGGACCTACGTCCT
GCAAGACAACAGCTTCCCCCTCCTCCTCCCGATGGCCTCTGGCCTGCAGTATCTGGAGGAAGCGCCCAAGTTCCTGGCCT
TCACCTGCGGCCTCCTGCGCGGCGCCCTCTGTACCCTGGGCATCGAGAGTGTGGTCACCGCCTCCGTGGCAGCCCTCCCC
GTCTGTAAGTTCCAGGTGGTGATTCCGAAATCCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .98 RPM
SRP007412_cerebellum 2 .19 RPM
SRP007412_heart 1 .54 RPM
SRP007412_kidney 15 .51 RPM
SRP007412_liver 6 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012869 ortholog_one2one 1 retrogene
retro_cjac_2364,
ENSG00000007255 ortholog_one2one 0 retrogenes
Macaca mulatta ENSMMUG00000022932 ortholog_one2one 1 retrogene
retro_mmul_686,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2899 64.44 51.46
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Download FASTA sequences of all ENSPPYG00000010109 retrocopies