Parental gene:

TRAPPC6A, ENSCJAG00000012869

Aliases:None
Description:trafficking protein particle complex 6A [Source:HGNC Symbol;Acc:23069]
Organism:Marmoset (Callithrix jacchus)
Coordinates:22:37216251..37228654(-)


>ENSCJAG00000012869
ATGGCGGATGCTGTGCTGTTCGAGTTCCTTCACACGGAGATGGTGGCGGAGTTGTGGGCTCACGACCCCGACCCCGGCCC
GGGGGTGAGCGCCGAGCCCCGGGGGGAGGAACCGGGGGCCGCCACGGGACAGAATATGAACCTGTCGGTCCTGGAGAGTG
TGGGCTTCCGCGTGGGCCAGGCTCTAGGCGAGAGGCTACCCCGAGAGATGCTGGCCTTCAGGGAGGAGCTGGATGTCCTC
AAGTTCTTGTGCAAAGACCTGTGGCTGGCCATATTCCAGAAGCAGATGGACAGCCTGCGCACCAATCACCAGGGGACCTA
TGTCCTGCAGGACAACAGCTTCCCCCTCCTCCTCCCCATGGCTGCTGGCCTGCAATATCTGGAGGAAGCGCCCAAGTTCC
TGGCCTTCACTTGCGGCCTCCTGCGCGGCGCCCTCTGTACCCTGGGCATCGAGAGCGTGGTCACCGCTTCCGTGGCAGCC
CTGCCTGGCTGTAAGTTCCAGGTGGTGATTCAGAACTCCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 1 .81 RPM
SRP051959_skeletal_muscle 1 .22 RPM
SRP051959_lymph_node 2 .65 RPM
SRP051959_lung 1 .25 RPM
SRP051959_liver 1 .91 RPM
SRP051959_kidney 10 .87 RPM
SRP051959_heart 0 .77 RPM
SRP051959_colon 1 .84 RPM



Species Parental gene accession Homology type Retrogenes number
ENSG00000007255 ortholog_one2one 0 retrogenes
Macaca mulatta ENSMMUG00000022932 ortholog_one2one 1 retrogene
retro_mmul_686,
Pongo abelii ENSPPYG00000010109 ortholog_one2one 1 retrogene
retro_pabe_2899,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2364 59.70 75.72
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Download FASTA sequences of all ENSCJAG00000012869 retrocopies