Parental gene: | DNAJB1, ENSPPYG00000009647 |
| Aliases: | None |
| Description: | DnaJ (Hsp40) homolog, subfamily B, member 1 [Source:HGNC Symbol;Acc:5270] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 19:14660125..14663690(-) |
>ENSPPYG00000009647
ATGGGTAAAGACTACTACCAGACGCTGGGCCTGGCCCGCGGCGCGTCGGACGAGGAGATCAAGCGGGCCTACCGCCGCCA
GGCGCTGCGCTACCACCCGGACAAGAACAAGGAGCCCGGCGCCGAGGAGAAGTTCAAGGAGATCGCCGAGGCCTACGACG
TGCTCAGCGACCCGCGCAAGCGCGAGATCTTCGACCGCTACGGGGAGGAAGGGCTAAAGGGCAGTGGCCCCAGTGGCGGT
AGCGGTGGTGGTGCCAATGGTACCTCTTTCAGCTACACATTCCATGGAGACCCTCATGCCATGTTTGCTGAGTTCTTCGG
TGGCAGAAATCCCTTTGACACCTTTTTTGGGCAGCGGAACGGGGAAGAAGGCATGGACATTGATGACCCATTCTCTGGCT
TCCCTATGGGCATGGGTGGCTTCACCAACGTGAACTTTGGCCGCTCCCGCTCTGCCCAAGAGCCCGCCCGAAAGAAGCAA
GATCCCCCAGTCACCCACGACCTTCGAGTCTCCCTTGAAGAGATCTACAGTGGCTGTACCAAGAAGATGAAAATCTCCCA
CAAGCGGCTAAACCCCGACGGAAAGAGCATTCGAAACGAAGATAAAATACTGACCATCGAAGTGAAGAAGGGGTGGAAAG
AAGGGACCAAAATCACTTTCCCCAAGGAAGGAGACCAGACCTCCAACAACATTCCAGCTGATATCGTCTTTGTTTTAAAG
GACAAGCCCCACAATATCTTTAAGAGAGATGGCTCTGATGTCATTTATCCTGCCAGGATCAGCCTCCGGGAGGCTCTGTG
TGGCTGCACAGTGAACGTCCCCACTCTGGACGGCAGGACGATACCCGTCGTATTCAAAGATGTCATCAGGCCTGGCATGC
GGCGAAAAGTTCCTGGAGAAGGCCTCCCCCTCCCCAAAACACCCGAGAAACGTGGGGACCTCATTATTGAGTTTGAAGTG
ATCTTCCCCGAAAGGATTCCCCAGACATCAAGAACCGTACTTGAGCAGGTTCTTCCAATATAG
ATGGGTAAAGACTACTACCAGACGCTGGGCCTGGCCCGCGGCGCGTCGGACGAGGAGATCAAGCGGGCCTACCGCCGCCA
GGCGCTGCGCTACCACCCGGACAAGAACAAGGAGCCCGGCGCCGAGGAGAAGTTCAAGGAGATCGCCGAGGCCTACGACG
TGCTCAGCGACCCGCGCAAGCGCGAGATCTTCGACCGCTACGGGGAGGAAGGGCTAAAGGGCAGTGGCCCCAGTGGCGGT
AGCGGTGGTGGTGCCAATGGTACCTCTTTCAGCTACACATTCCATGGAGACCCTCATGCCATGTTTGCTGAGTTCTTCGG
TGGCAGAAATCCCTTTGACACCTTTTTTGGGCAGCGGAACGGGGAAGAAGGCATGGACATTGATGACCCATTCTCTGGCT
TCCCTATGGGCATGGGTGGCTTCACCAACGTGAACTTTGGCCGCTCCCGCTCTGCCCAAGAGCCCGCCCGAAAGAAGCAA
GATCCCCCAGTCACCCACGACCTTCGAGTCTCCCTTGAAGAGATCTACAGTGGCTGTACCAAGAAGATGAAAATCTCCCA
CAAGCGGCTAAACCCCGACGGAAAGAGCATTCGAAACGAAGATAAAATACTGACCATCGAAGTGAAGAAGGGGTGGAAAG
AAGGGACCAAAATCACTTTCCCCAAGGAAGGAGACCAGACCTCCAACAACATTCCAGCTGATATCGTCTTTGTTTTAAAG
GACAAGCCCCACAATATCTTTAAGAGAGATGGCTCTGATGTCATTTATCCTGCCAGGATCAGCCTCCGGGAGGCTCTGTG
TGGCTGCACAGTGAACGTCCCCACTCTGGACGGCAGGACGATACCCGTCGTATTCAAAGATGTCATCAGGCCTGGCATGC
GGCGAAAAGTTCCTGGAGAAGGCCTCCCCCTCCCCAAAACACCCGAGAAACGTGGGGACCTCATTATTGAGTTTGAAGTG
ATCTTCCCCGAAAGGATTCCCCAGACATCAAGAACCGTACTTGAGCAGGTTCTTCCAATATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 89 .35 RPM |
| SRP007412_cerebellum | 93 .51 RPM |
| SRP007412_heart | 36 .12 RPM |
| SRP007412_kidney | 192 .12 RPM |
| SRP007412_liver | 96 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004666 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011252 | other_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018228 | other_paralog | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000010594 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000021824 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2136 | 89.44 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000009647 retrocopies