Parental gene: | VAPA, ENSPPYG00000009006 |
| Aliases: | None |
| Description: | Vesicle-associated membrane protein-associated protein A [Source:UniProtKB/Swiss-Prot;Acc:Q5R601] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 18:22196688..22242771(-) |
>ENSPPYG00000009006
ATGGCGTCCGCCTCAGGGGCCATGGCGAAGCACGAGCAGATCCTGGTCCTCGACCCGCCCACAGACCTCAAATTCAAAGG
CCCCTTCACAGATGTAGTCACTACAAATCTTAAATTGCGAAATCCATCGGATAGAAAAGTGTGTTTCAAAGTGAAGACTA
CAGCACCTCGCCGGTACTGCGTGAGGCCCAACAGTGGAATTATTGACCCAGGGTCAACTGTGACTGTTTCAGTAATGCTA
CAGCCCTTTGACTATGATCCGAATGAAAAGAGTAAACACAAGTTTATGGTACAGACAATTTTTGCTCCACCAAACACTTC
AGATATGGAAGCTGTGTGGAAAGAGGCAAAACCTGATGAATTAATGGATTCCAAATTGAGATGTGTATTTGAAATGCCCA
ATGAAAATGATAAATTGGGTATAAATCCACCAGGGAATGCTCCAACTGTCGCTTCAGTGAGCAGCATCAACAACACAGTT
GCAACACCTGCCAGTTATCACACGAAGGATGACCCCAGGGGATTCAGTGTGTTGAAACAGGAGAAACAGAAGAATGACAT
GGAACCTAGCAAAGCTGTTCCACTGAATGCATCTAAACAAGATGGACCTATGCCAAAACCACACAGTGTTTCACTTAATG
ATACCGAAACAAGGAAACTAATGGAAGAGTGTAAAAGACTTCAGGGAGAAATGATGAAGCTATCAGAAGAAAATCGACAC
CTGAGAGATGAAGGTTTAAGGCTCAGAAAGGTAGCACATTCGGATAAACCTGGATCAACCTCAACTGCATCCTTCAGAGA
TAATGTCACCAGTCCTCTTCCTTCACTTCTTGTTGTAATTGCAGCCATTTTCATTGGATTCTTTCTAGGGAAATTCATCT
TGTAG
ATGGCGTCCGCCTCAGGGGCCATGGCGAAGCACGAGCAGATCCTGGTCCTCGACCCGCCCACAGACCTCAAATTCAAAGG
CCCCTTCACAGATGTAGTCACTACAAATCTTAAATTGCGAAATCCATCGGATAGAAAAGTGTGTTTCAAAGTGAAGACTA
CAGCACCTCGCCGGTACTGCGTGAGGCCCAACAGTGGAATTATTGACCCAGGGTCAACTGTGACTGTTTCAGTAATGCTA
CAGCCCTTTGACTATGATCCGAATGAAAAGAGTAAACACAAGTTTATGGTACAGACAATTTTTGCTCCACCAAACACTTC
AGATATGGAAGCTGTGTGGAAAGAGGCAAAACCTGATGAATTAATGGATTCCAAATTGAGATGTGTATTTGAAATGCCCA
ATGAAAATGATAAATTGGGTATAAATCCACCAGGGAATGCTCCAACTGTCGCTTCAGTGAGCAGCATCAACAACACAGTT
GCAACACCTGCCAGTTATCACACGAAGGATGACCCCAGGGGATTCAGTGTGTTGAAACAGGAGAAACAGAAGAATGACAT
GGAACCTAGCAAAGCTGTTCCACTGAATGCATCTAAACAAGATGGACCTATGCCAAAACCACACAGTGTTTCACTTAATG
ATACCGAAACAAGGAAACTAATGGAAGAGTGTAAAAGACTTCAGGGAGAAATGATGAAGCTATCAGAAGAAAATCGACAC
CTGAGAGATGAAGGTTTAAGGCTCAGAAAGGTAGCACATTCGGATAAACCTGGATCAACCTCAACTGCATCCTTCAGAGA
TAATGTCACCAGTCCTCTTCCTTCACTTCTTGTTGTAATTGCAGCCATTTTCATTGGATTCTTTCTAGGGAAATTCATCT
TGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 59 .27 RPM |
| SRP007412_cerebellum | 101 .17 RPM |
| SRP007412_heart | 40 .85 RPM |
| SRP007412_kidney | 41 .14 RPM |
| SRP007412_liver | 37 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000008965 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000021442 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014765 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1323 | 95.80 | 57.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000009006 retrocopies