Parental gene: | CTDNEP1, ENSPPYG00000007902 |
| Aliases: | None |
| Description: | CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:19085] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:7256218..7263887(-) |
>ENSPPYG00000007902
ATGATGCGGACGCAGTGTCTGCTGGGGCTGCGCACGTTCGTGGCCTTCGCCGCCAAGCTCTGGAGCTTCTTCATTTACCT
TTTGCGGAGGCAGATCCGCACGGTAATTCAGTACCAAACTGTTCGATATGATATCCTCCCCTTATCTCCTGTGTCCCGGA
ATCGGCTAGCCCAGGTGAAGAGGAAGATCCTGGTGCTGGATCTGGATGAGACACTTATTCACTCCCACCATGATGGGGTC
CTGAGGCCCACAGTCCGGCCTGGTACGCCTCCTGACTTCATCCTCAAGGTGGTAATAGACAAACATCCTGTCCGGTTTTT
TGTACATAAGAGGCCCCATGTGGATTTCTTCCTGGAAGTGGTGAGCCAGTGGTACGAGCTGGTGGTGTTTACAGCAAGCA
TGGAGATCTATGGCTCTGCTGTGGCAGATAAACTGGACAACAGCAGAAGCATTCTTAAGAGGAGATATTACAGACAGCAC
TGCACTTTGGAGTTGGGCAGCTACATCAAGGACCTCTCTGTGGTCCACAGTGATCTCTCCAGCATTGTGATCCTGGATAA
CTCCCCAGGGGCTTACAGGAGCCATCCAGACAATGCCATCCCCATCAAATCCTGGTTCAGTGACCCCAGCGACACAGCCC
TTCTCAACCTGCTCCCGATGCTGGATGCCCTCAGGTTCACCGCTGACGTTCGTTCCGTGCTGAGCCGAAACCTTCACCAA
CATCGGCTCTGGTGA
ATGATGCGGACGCAGTGTCTGCTGGGGCTGCGCACGTTCGTGGCCTTCGCCGCCAAGCTCTGGAGCTTCTTCATTTACCT
TTTGCGGAGGCAGATCCGCACGGTAATTCAGTACCAAACTGTTCGATATGATATCCTCCCCTTATCTCCTGTGTCCCGGA
ATCGGCTAGCCCAGGTGAAGAGGAAGATCCTGGTGCTGGATCTGGATGAGACACTTATTCACTCCCACCATGATGGGGTC
CTGAGGCCCACAGTCCGGCCTGGTACGCCTCCTGACTTCATCCTCAAGGTGGTAATAGACAAACATCCTGTCCGGTTTTT
TGTACATAAGAGGCCCCATGTGGATTTCTTCCTGGAAGTGGTGAGCCAGTGGTACGAGCTGGTGGTGTTTACAGCAAGCA
TGGAGATCTATGGCTCTGCTGTGGCAGATAAACTGGACAACAGCAGAAGCATTCTTAAGAGGAGATATTACAGACAGCAC
TGCACTTTGGAGTTGGGCAGCTACATCAAGGACCTCTCTGTGGTCCACAGTGATCTCTCCAGCATTGTGATCCTGGATAA
CTCCCCAGGGGCTTACAGGAGCCATCCAGACAATGCCATCCCCATCAAATCCTGGTTCAGTGACCCCAGCGACACAGCCC
TTCTCAACCTGCTCCCGATGCTGGATGCCCTCAGGTTCACCGCTGACGTTCGTTCCGTGCTGAGCCGAAACCTTCACCAA
CATCGGCTCTGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .83 RPM |
| SRP007412_cerebellum | 18 .85 RPM |
| SRP007412_heart | 8 .58 RPM |
| SRP007412_kidney | 18 .53 RPM |
| SRP007412_liver | 8 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019443 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013673 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000004654 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000175826 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013777 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000010547 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000018559 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004389 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008668 | ortholog_one2one | 2 retrogenes | |
| Drosophila melanogaster | FBgn0029067 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2294 | 94.67 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2645 | 83.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000007902 retrocopies