Parental gene: | CTDNEP1, ENSDNOG00000013673 |
| Aliases: | None |
| Description: | CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:19085] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_284:9232..14271(-) |
>ENSDNOG00000013673
ATGATGCGGACGCAGTGTCTGCTGGGGCTGCGCACGTTCGTGGCCTTCGCCGCCAAGCTCTGGAGCTTCTTCATTTACCT
TTTGCGGAGGCAGATCCGCACGGTAATTCAGTACCAAACTGTTCGGTATGATATCCTTCCTTTATCTCCTGTGTCTCGGA
ATCGGCTGGGCCAGGTGAAGAGGAAGATCCTGGTGCTGGATCTGGATGAAACACTTATCCACTCCCACCATGATGGGGTC
CTGAGGCCCACGGTTCGGCCTGGAACACCTCCTGACTTCATCCTCAAGGTGGTAATAGACAAACATCCTGTCCGGTTTTT
TGTACATAAGAGACCCCATGTGGATTTCTTCTTAGAAGTGGTGAGCCAGTGGTACGAGCTGGTGGTGTTCACAGCAAGCA
TGGAGATTTATGACTCTGCTGTGACAGACAAACTGGACAATAGCAGAAGCATTCTCAAGAGAAGATACTATAGACAGCAC
TGCACTTTGGAGTTGGGCAGTTACATCAAGGACCTCTCTGTGGTCCACAGTGACCTCTCTAGCATTGTGATCCTGGATAA
CTCCCCAGGGGCTTACAGGAGTCATCCAGACAATGCCATCCCCATCAAGTCCTGGTTTAGTGACCCCAGTGACACAGCCC
TTCTCAACCTGCTCCCAATGCTAGATGCCCTCAGGTTCACTGCTGATGTTCGTTCCGTGCTGAGCCGAAACCTTCACCAA
CACAGGCTCTGGTGA
ATGATGCGGACGCAGTGTCTGCTGGGGCTGCGCACGTTCGTGGCCTTCGCCGCCAAGCTCTGGAGCTTCTTCATTTACCT
TTTGCGGAGGCAGATCCGCACGGTAATTCAGTACCAAACTGTTCGGTATGATATCCTTCCTTTATCTCCTGTGTCTCGGA
ATCGGCTGGGCCAGGTGAAGAGGAAGATCCTGGTGCTGGATCTGGATGAAACACTTATCCACTCCCACCATGATGGGGTC
CTGAGGCCCACGGTTCGGCCTGGAACACCTCCTGACTTCATCCTCAAGGTGGTAATAGACAAACATCCTGTCCGGTTTTT
TGTACATAAGAGACCCCATGTGGATTTCTTCTTAGAAGTGGTGAGCCAGTGGTACGAGCTGGTGGTGTTCACAGCAAGCA
TGGAGATTTATGACTCTGCTGTGACAGACAAACTGGACAATAGCAGAAGCATTCTCAAGAGAAGATACTATAGACAGCAC
TGCACTTTGGAGTTGGGCAGTTACATCAAGGACCTCTCTGTGGTCCACAGTGACCTCTCTAGCATTGTGATCCTGGATAA
CTCCCCAGGGGCTTACAGGAGTCATCCAGACAATGCCATCCCCATCAAGTCCTGGTTTAGTGACCCCAGTGACACAGCCC
TTCTCAACCTGCTCCCAATGCTAGATGCCCTCAGGTTCACTGCTGATGTTCGTTCCGTGCTGAGCCGAAACCTTCACCAA
CACAGGCTCTGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 41 .42 RPM |
| SRP012922_cerebellum | 42 .20 RPM |
| SRP012922_heart | 15 .78 RPM |
| SRP012922_kidney | 51 .75 RPM |
| SRP012922_liver | 13 .78 RPM |
| SRP012922_lung | 51 .16 RPM |
| SRP012922_quadricep_muscle | 90 .52 RPM |
| SRP012922_spleen | 53 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019443 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000004654 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000175826 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013777 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000010547 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000018559 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004389 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007902 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000008668 | ortholog_one2one | 2 retrogenes | |
| Drosophila melanogaster | FBgn0029067 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1802 | 86.94 | 99.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_2494 | 80.79 | 70.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000013673 retrocopies