Parental gene: | CTBP2, ENSPPYG00000002746 |
| Aliases: | None |
| Description: | C-terminal binding protein 2 [Source:HGNC Symbol;Acc:2495] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:124592483..124722939(-) |
>ENSPPYG00000002746
ATGCCAGTTCCCAGCAGGCATATAAATATTGGTCGTTCTCAGAGCTGGGATGCTGCCGGGTGGTACGAGGGCCCCTGGGA
GAACGCTGAGTCCCTGCGGCCTCTGGGGAGGAGAAGCTCCCTGACGTATGGCACAGCAGAGGGGACTTGGTTTGAGCCAA
ACCACCGACCACAGGACGCTGCCCTGCCCAGGGCCGCCGAGCCCTACCTGTACCAGGAGGCCGTTTATAACTCAGTGGCT
GCAAGAAAGGGGTCTACTCCTGACTTCACCTTCTACGACAGCAGACAGGCAGTGATGTCTGGTCGCAGCCCCCTGCTGCC
ACGGGATTACTACAGTGACCCGTCTGGAGCTGCTAGGGTACCCAAAGAGCCTCCCCTCTATCGGGACCCAGGAGTCAGCC
GGCCGGTCCCCAGCTACGGAGTGCTTAGCAGCAGAACGTCATGGGATCCAATGCAAGGCCGGTCACCTGCCCTGCAGGAC
GCCGGTCACCTGTACCGGGATCCTGGAGGTAAAATGATCCCTCAGGGGCAGCGGACACAGAGCAGGGCTGCATCCCCCGG
GCGGTATGGACAGGAGCAGCCCAACACCAGGTATGGGGCGGAGGGGCCTGCCTACCCCCCCAGCCAGGTCTTCAGTGACA
TCAGCGAAAGACCTATTGACCCTGCCCCTGCCAGACAGGTGGCCCCGACGTGCCTGGTTGTGGACCCCAGTTCAGCTGCT
GCCCCCGAAGGCAGCACAGGGGTGGCCCCAGGGGCCCTGAATCGAGGCTATGGGCCTGCCCGGGAAAGCATCCCATCCAA
GATGGCTTACGAGACTTACGAAGCTGACCTGTCCACCTTCCAGGGTCGTGGTGGCAGGAGGACTGTGCCCCCTGAGTTCC
TGGCCTTTCTGCGGGCGGAGGGGCTGGCAGAGGCCACGCTGGCAGCCCTACTACAGCAGGGCTTTGACTCTCCGGCCGTC
CTGGCTACCCTGGAGGACGCGGATATCAAGTCTGTCGCACCCAACCTGGGCCAGGCCCGTGTTCTGAGCCGCCTGGCCAA
TAGCTGCAGGACTGAGATGCAGCTGCGGAGGCAGGACCGGGTGGGCCCGCTGCCCCGGGCGCGGTCCAGCAGCTTCAGCC
ACCGAAGCGAACTGCTCCATGGTGACTTGGCTTCTCTGGGCGCTGCGGCTCCTCTGCAGACAGCGTCCCCCCGAGCTGGA
GACCCGGCTCGCCGTCCCTCCAGCGCACCATCTCAGCACCTCCTGGAGACGGCGGCCACCTATTCTGCCCCTGGCGTGGG
CGCCCATGCCCCCCACTTCTCCTCCAACTCCGGGTACAGCTCTCCCACCCCTTGTGCCCTGACAGCACGTCTGAGCCCCA
CGTACCCCCTGCAGGCAGGGGTGGCCTTGACTAACCCGGGCCCCTCGAACCCCCTTCACCCAGGCCCCAGAACAGCCTAC
TCCACAGCATACACGGTGCCCATGGAACTGCTAAAGAGGGAGCGCAACGTGGCCGCCTCTCCGCTGCCCAGCCCTCACGG
CAGCCCCCAGGTCTTGCGGAAGCCAGGTGCACCCCTGGGGCCATCCACCCTGCCGCCGGCCAGCCAGAGCCTCCACACGC
CTCACTCACCGTACCAGAAGGTGGCCCGGCGCACAGGGGCGCCCATCATCGTGTCCACCATGCTTGCACCAGAACCAAGT
ATCCGCCCCCAGATCATGAACGGCCCCCTGCACCCCCGCCCCCTGGTGGCGCTGCTGGACGGCCGCGACTGCACTGTGGA
GATGCCCATCCTGAAGGACCTGGCCACCGTGGCCTTCTGTGACGCGCAGTCCACGCAGGAAATCCACGAAAAGGTTCTAA
ACGAAGCCGTGGGTGCCATGATGTACCACACCATCACCCTCACCAGGGAGGACCTGGAGAAGTTCAAGGCCCTGAGAGTG
ATTGTGCGGATAGGCAGCGGCTACGACAACGTGGACATCAAGGCTGCCGGTGAGCTCGGAATTGCTGTGTGCAACATTCC
ATCTGCAGCCGTGGAAGAGACGGCGGACTCTACCATCTGCCACATCCTCAATCTGTACCGGAGGAACACGTGGCTGTACC
AGGCACTGCGGGAAGGCACGCGGGTTCAGAGCGTGGAGCAGATCCGCGAGGTGGCCTCGGGAGCGGCCCGCATCCGTGGG
GAGACGCTGGGCCTCATCGGCTTTGGTCGCACGGGGCAGGCGGTTGCAGTTCGAGCCAAGGCCTTTGGATTCAGCGTCAT
ATTTTATGACCCCTACTTGCAGGATGGGATCGAGCGGTCCCTGGGCGTGCAGAGGGTCTACACCCTGCAGGATTTGCTGT
ATCAGAGCGACTGCGTCTCCTTGCACTGCAATCTCAACGAACATAACCACCACCTCATCAATGACTTTACCATAAAGCAG
ATGAGGCAGGGAGCATTCCTTGTGAACGCAGCCCGTGGTGGCCTGGTGGACGAGAAAGCCTTAGCACAAGCCCTCAAGGA
GGGCAGGATACGAGGGGCAGCCCTCGACGTGCATGAGTCAGAGCCCTTCAGCTTTGCTCAGGGTCCATTGAAAGATGCCC
CGAATCTCATCTGCACTCCTCACACTGCCTGGTACAGTGAGCAGGCGTCACTGGAGATGAGGGAGGCAGCTGCCACCGAG
ATCCGCCGAGCCATCACAGGTCGCATCCCAGAAAGCTTAAGAAATTGTGTGAACAAGGAATTCTTTGTCACATCAGCGCC
TTGGTCAGTAATAGACCAGCAAGCAATTCATCCTGAGCTCAATGGTGCCACATACAGATATCCGCCAGGCATCGTGGGTG
TGGCTCCAGGAGGACTTCCTGCAGCCATGGAAGGGATCATCCCTGGAGGCATCCCAGTGACTCACAACCTCCCGACAGTG
GCACATCCTTCCCAAGCGCCCTCTCCCAACCAGCCCACAAAACACGGGGACAATCGAGAGCACCCCAACGAGCAATAG
ATGCCAGTTCCCAGCAGGCATATAAATATTGGTCGTTCTCAGAGCTGGGATGCTGCCGGGTGGTACGAGGGCCCCTGGGA
GAACGCTGAGTCCCTGCGGCCTCTGGGGAGGAGAAGCTCCCTGACGTATGGCACAGCAGAGGGGACTTGGTTTGAGCCAA
ACCACCGACCACAGGACGCTGCCCTGCCCAGGGCCGCCGAGCCCTACCTGTACCAGGAGGCCGTTTATAACTCAGTGGCT
GCAAGAAAGGGGTCTACTCCTGACTTCACCTTCTACGACAGCAGACAGGCAGTGATGTCTGGTCGCAGCCCCCTGCTGCC
ACGGGATTACTACAGTGACCCGTCTGGAGCTGCTAGGGTACCCAAAGAGCCTCCCCTCTATCGGGACCCAGGAGTCAGCC
GGCCGGTCCCCAGCTACGGAGTGCTTAGCAGCAGAACGTCATGGGATCCAATGCAAGGCCGGTCACCTGCCCTGCAGGAC
GCCGGTCACCTGTACCGGGATCCTGGAGGTAAAATGATCCCTCAGGGGCAGCGGACACAGAGCAGGGCTGCATCCCCCGG
GCGGTATGGACAGGAGCAGCCCAACACCAGGTATGGGGCGGAGGGGCCTGCCTACCCCCCCAGCCAGGTCTTCAGTGACA
TCAGCGAAAGACCTATTGACCCTGCCCCTGCCAGACAGGTGGCCCCGACGTGCCTGGTTGTGGACCCCAGTTCAGCTGCT
GCCCCCGAAGGCAGCACAGGGGTGGCCCCAGGGGCCCTGAATCGAGGCTATGGGCCTGCCCGGGAAAGCATCCCATCCAA
GATGGCTTACGAGACTTACGAAGCTGACCTGTCCACCTTCCAGGGTCGTGGTGGCAGGAGGACTGTGCCCCCTGAGTTCC
TGGCCTTTCTGCGGGCGGAGGGGCTGGCAGAGGCCACGCTGGCAGCCCTACTACAGCAGGGCTTTGACTCTCCGGCCGTC
CTGGCTACCCTGGAGGACGCGGATATCAAGTCTGTCGCACCCAACCTGGGCCAGGCCCGTGTTCTGAGCCGCCTGGCCAA
TAGCTGCAGGACTGAGATGCAGCTGCGGAGGCAGGACCGGGTGGGCCCGCTGCCCCGGGCGCGGTCCAGCAGCTTCAGCC
ACCGAAGCGAACTGCTCCATGGTGACTTGGCTTCTCTGGGCGCTGCGGCTCCTCTGCAGACAGCGTCCCCCCGAGCTGGA
GACCCGGCTCGCCGTCCCTCCAGCGCACCATCTCAGCACCTCCTGGAGACGGCGGCCACCTATTCTGCCCCTGGCGTGGG
CGCCCATGCCCCCCACTTCTCCTCCAACTCCGGGTACAGCTCTCCCACCCCTTGTGCCCTGACAGCACGTCTGAGCCCCA
CGTACCCCCTGCAGGCAGGGGTGGCCTTGACTAACCCGGGCCCCTCGAACCCCCTTCACCCAGGCCCCAGAACAGCCTAC
TCCACAGCATACACGGTGCCCATGGAACTGCTAAAGAGGGAGCGCAACGTGGCCGCCTCTCCGCTGCCCAGCCCTCACGG
CAGCCCCCAGGTCTTGCGGAAGCCAGGTGCACCCCTGGGGCCATCCACCCTGCCGCCGGCCAGCCAGAGCCTCCACACGC
CTCACTCACCGTACCAGAAGGTGGCCCGGCGCACAGGGGCGCCCATCATCGTGTCCACCATGCTTGCACCAGAACCAAGT
ATCCGCCCCCAGATCATGAACGGCCCCCTGCACCCCCGCCCCCTGGTGGCGCTGCTGGACGGCCGCGACTGCACTGTGGA
GATGCCCATCCTGAAGGACCTGGCCACCGTGGCCTTCTGTGACGCGCAGTCCACGCAGGAAATCCACGAAAAGGTTCTAA
ACGAAGCCGTGGGTGCCATGATGTACCACACCATCACCCTCACCAGGGAGGACCTGGAGAAGTTCAAGGCCCTGAGAGTG
ATTGTGCGGATAGGCAGCGGCTACGACAACGTGGACATCAAGGCTGCCGGTGAGCTCGGAATTGCTGTGTGCAACATTCC
ATCTGCAGCCGTGGAAGAGACGGCGGACTCTACCATCTGCCACATCCTCAATCTGTACCGGAGGAACACGTGGCTGTACC
AGGCACTGCGGGAAGGCACGCGGGTTCAGAGCGTGGAGCAGATCCGCGAGGTGGCCTCGGGAGCGGCCCGCATCCGTGGG
GAGACGCTGGGCCTCATCGGCTTTGGTCGCACGGGGCAGGCGGTTGCAGTTCGAGCCAAGGCCTTTGGATTCAGCGTCAT
ATTTTATGACCCCTACTTGCAGGATGGGATCGAGCGGTCCCTGGGCGTGCAGAGGGTCTACACCCTGCAGGATTTGCTGT
ATCAGAGCGACTGCGTCTCCTTGCACTGCAATCTCAACGAACATAACCACCACCTCATCAATGACTTTACCATAAAGCAG
ATGAGGCAGGGAGCATTCCTTGTGAACGCAGCCCGTGGTGGCCTGGTGGACGAGAAAGCCTTAGCACAAGCCCTCAAGGA
GGGCAGGATACGAGGGGCAGCCCTCGACGTGCATGAGTCAGAGCCCTTCAGCTTTGCTCAGGGTCCATTGAAAGATGCCC
CGAATCTCATCTGCACTCCTCACACTGCCTGGTACAGTGAGCAGGCGTCACTGGAGATGAGGGAGGCAGCTGCCACCGAG
ATCCGCCGAGCCATCACAGGTCGCATCCCAGAAAGCTTAAGAAATTGTGTGAACAAGGAATTCTTTGTCACATCAGCGCC
TTGGTCAGTAATAGACCAGCAAGCAATTCATCCTGAGCTCAATGGTGCCACATACAGATATCCGCCAGGCATCGTGGGTG
TGGCTCCAGGAGGACTTCCTGCAGCCATGGAAGGGATCATCCCTGGAGGCATCCCAGTGACTCACAACCTCCCGACAGTG
GCACATCCTTCCCAAGCGCCCTCTCCCAACCAGCCCACAAAACACGGGGACAATCGAGAGCACCCCAACGAGCAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .96 RPM |
| SRP007412_cerebellum | 15 .81 RPM |
| SRP007412_heart | 3 .97 RPM |
| SRP007412_kidney | 15 .51 RPM |
| SRP007412_liver | 2 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012775 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012539 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000175029 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000007076 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1706 | 77.86 | 89.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1710 | 78.86 | 89.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1711 | 76.24 | 89.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1719 | 77.92 | 89.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_1737 | 73.13 | 89.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_1750 | 80.11 | 80.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_1773 | 77.11 | 89.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_3228 | 78.11 | 89.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_pabe_3230 | 77.36 | 89.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_pabe_3587 | 80.31 | 84.94 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000002746 retrocopies