Parental gene: | NRBF2, ENSPPYG00000002411 |
| Aliases: | None |
| Description: | Nuclear receptor-binding factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R4C9] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:72566369..72589488(-) |
>ENSPPYG00000002411
ATGGAAGTAATGGAAGGACCCCTCAACCTGGCTCATCAACAGAGCAGACGAGCAGACCGTTTATTAGCTGCAGGCAAATA
CGAAGAGGCTATTTCTTGTCACAAAAAGGCTGCAGCCTATCTTTCTGAAGCCATGAAGCTGACACAGTCAGAGCAGGCTC
ATCTTTCACTGGAATTGCAAAGGGATAGCCATATGAAACAGCTCCTCCTCATCCAAGAGAGATGGAAAAGGGCCCAGCGT
GAAGAAAGATTGAAAGCCCAGCAGAACACAGACAAGGATGTAGCTGCCCATCTTCAGACATCTCACAAACCCTCTGCAGA
GGATGCAGAGGGCCAGAGTCCCCTTTCTCAGAAGTACAGCCCTTCCACAGAGAAATGCCTGCCTGAGATTCAGGGGATCT
TTGACAGGGATCCAGACACACTACTTTATTTACTTCAGCAAAAGAGTGAGCCAGCAGAGCCGTGTATTGGAAGCAAAGCC
CCAAAAGATGATAAAACAATTATAGAGGAGCAGGCAACCAAAATTGCAGATTTGAAGAGGCATGTGGAATTCCTTGTGGC
TGAGAATGAAAGATTAAGGAAAGAAAATAAACAACTAAAGGCTGAAAAGGCCAGACTTCTAAAAGGTCCAATAGAAAAGG
AGCTGGATGTAGATGCTGATTTTGTAGAAACATCAGAGTTATGGAGCTTGCCACCACATTCAGAAACTGCTACAGCCTCC
TCAACCTGGCAGAAGTTCGCAGCAAATACCGGGAAAGCCAAGGACATTCCAATCCCCAATCTTCCTCCCTTGGATTTTCC
ATCTCCAGAACTTCCTCTTATGGAGCTCTCTGAGGATATTCTGAAAGGATTTATGAATAATTAA
ATGGAAGTAATGGAAGGACCCCTCAACCTGGCTCATCAACAGAGCAGACGAGCAGACCGTTTATTAGCTGCAGGCAAATA
CGAAGAGGCTATTTCTTGTCACAAAAAGGCTGCAGCCTATCTTTCTGAAGCCATGAAGCTGACACAGTCAGAGCAGGCTC
ATCTTTCACTGGAATTGCAAAGGGATAGCCATATGAAACAGCTCCTCCTCATCCAAGAGAGATGGAAAAGGGCCCAGCGT
GAAGAAAGATTGAAAGCCCAGCAGAACACAGACAAGGATGTAGCTGCCCATCTTCAGACATCTCACAAACCCTCTGCAGA
GGATGCAGAGGGCCAGAGTCCCCTTTCTCAGAAGTACAGCCCTTCCACAGAGAAATGCCTGCCTGAGATTCAGGGGATCT
TTGACAGGGATCCAGACACACTACTTTATTTACTTCAGCAAAAGAGTGAGCCAGCAGAGCCGTGTATTGGAAGCAAAGCC
CCAAAAGATGATAAAACAATTATAGAGGAGCAGGCAACCAAAATTGCAGATTTGAAGAGGCATGTGGAATTCCTTGTGGC
TGAGAATGAAAGATTAAGGAAAGAAAATAAACAACTAAAGGCTGAAAAGGCCAGACTTCTAAAAGGTCCAATAGAAAAGG
AGCTGGATGTAGATGCTGATTTTGTAGAAACATCAGAGTTATGGAGCTTGCCACCACATTCAGAAACTGCTACAGCCTCC
TCAACCTGGCAGAAGTTCGCAGCAAATACCGGGAAAGCCAAGGACATTCCAATCCCCAATCTTCCTCCCTTGGATTTTCC
ATCTCCAGAACTTCCTCTTATGGAGCTCTCTGAGGATATTCTGAAAGGATTTATGAATAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 15 .59 RPM |
| SRP007412_cerebellum | 12 .04 RPM |
| SRP007412_heart | 4 .61 RPM |
| SRP007412_kidney | 9 .88 RPM |
| SRP007412_liver | 33 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004648 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000148572 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013016 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000010849 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000017726 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017183 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000075000 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005856 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002539 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000641 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000004744 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011341 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2327 | 88.44 | 78.40 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3285 | 93.29 | 98.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3286 | 93.31 | 98.61 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000002411 retrocopies