Parental gene: | NFYC, ENSPPYG00000001483 |
| Aliases: | None |
| Description: | Nuclear transcription factor Y subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:Q5RA23] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:189316313..189357326(-) |
>ENSPPYG00000001483
ATGACAGAGGAGGATATGATCAAAATGCAAGTCACAAAAGTGAGTGAAGAAGTTGTCGAGATGTCCACAGAAGGAGGATT
TGGTGGTACTAGCAGCAGTGATGCCCAGCAAAGCCTACAGTCGTTCTGGCCTCGGGTCATGGAAGAAATCCGGAATTTAA
CAGTGAAAGACTTCCGAGTGCAGGAACTCCCACTGGCTCGTATTAAGAAGATTATGAAACTGGATGAAGATGTGAAGATG
ATCAGTGCAGAAGCGCCTGTACTCTTTGCCAAGGCAGCCCAGATTTTTATCACAGAGTTGACTCTTCGAGCCTGGATTCA
CACAGAAGATAACAAGCGCCGGACTCTACAGAGAAATGATATCGCCATGGCAATTACAAAATTTGATCAGTTTGATTTTC
TCATCGATATTGTTCCAAGAGATGAACTGAAACCTCCAAAGCGTCAGGAGGACGTGCGCCAGTCTGTAACTCCTGCCGAG
CCAGTCCAGTACTATTTCACACTGGCTCAGCAGCCCGCCGCTGTCCAAGTCCAGGGCCAGCAGCAAGGCCAGCAGACCAC
CAGCTCCACGACCACCATCCAGCCTGGGCAGATCATCATCGCACAGCCTCAGCAGGGCCAGACCACACCTGTGACAATGC
AGGTTGGAGAAGGTCAGCAGGTGCAGATTGTCCAGGCCCAGCCACAGGGTCAAGCCCAACAGGCCCAGAGTGGCACTGGA
CAGACCATGCAGGTGATGCAGCAGATCATCACTAACACAGGAGAGATCCAGCAGATCCCGGTGCAGCTGAATGCCGGCCA
GCTGCAGTATATCCGCTTAGCCCAGCCTGTATCAGGCACTCAAGTTGTGCAGGGACAGATCCAGACGCTTGCCACCAATG
CTCAACAGATTACACAGACAGAGGTCCAGCAAGGACAGCAGCAGTTCAGCCAGTTCACAGATGGACAGCAGCTCTACCAG
ATCCAGCAAGTCACCATGCCTGCGGGCCAGGACCTCGCCCAGCCCATGTTCATCCAGTCAGCCAACCAGCCCTCCGACGG
GCAGGCCCCCCAGGTGACCGGCGACTGA
ATGACAGAGGAGGATATGATCAAAATGCAAGTCACAAAAGTGAGTGAAGAAGTTGTCGAGATGTCCACAGAAGGAGGATT
TGGTGGTACTAGCAGCAGTGATGCCCAGCAAAGCCTACAGTCGTTCTGGCCTCGGGTCATGGAAGAAATCCGGAATTTAA
CAGTGAAAGACTTCCGAGTGCAGGAACTCCCACTGGCTCGTATTAAGAAGATTATGAAACTGGATGAAGATGTGAAGATG
ATCAGTGCAGAAGCGCCTGTACTCTTTGCCAAGGCAGCCCAGATTTTTATCACAGAGTTGACTCTTCGAGCCTGGATTCA
CACAGAAGATAACAAGCGCCGGACTCTACAGAGAAATGATATCGCCATGGCAATTACAAAATTTGATCAGTTTGATTTTC
TCATCGATATTGTTCCAAGAGATGAACTGAAACCTCCAAAGCGTCAGGAGGACGTGCGCCAGTCTGTAACTCCTGCCGAG
CCAGTCCAGTACTATTTCACACTGGCTCAGCAGCCCGCCGCTGTCCAAGTCCAGGGCCAGCAGCAAGGCCAGCAGACCAC
CAGCTCCACGACCACCATCCAGCCTGGGCAGATCATCATCGCACAGCCTCAGCAGGGCCAGACCACACCTGTGACAATGC
AGGTTGGAGAAGGTCAGCAGGTGCAGATTGTCCAGGCCCAGCCACAGGGTCAAGCCCAACAGGCCCAGAGTGGCACTGGA
CAGACCATGCAGGTGATGCAGCAGATCATCACTAACACAGGAGAGATCCAGCAGATCCCGGTGCAGCTGAATGCCGGCCA
GCTGCAGTATATCCGCTTAGCCCAGCCTGTATCAGGCACTCAAGTTGTGCAGGGACAGATCCAGACGCTTGCCACCAATG
CTCAACAGATTACACAGACAGAGGTCCAGCAAGGACAGCAGCAGTTCAGCCAGTTCACAGATGGACAGCAGCTCTACCAG
ATCCAGCAAGTCACCATGCCTGCGGGCCAGGACCTCGCCCAGCCCATGTTCATCCAGTCAGCCAACCAGCCCTCCGACGG
GCAGGCCCCCCAGGTGACCGGCGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 30 .74 RPM |
| SRP007412_cerebellum | 31 .25 RPM |
| SRP007412_heart | 13 .67 RPM |
| SRP007412_kidney | 29 .20 RPM |
| SRP007412_liver | 22 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000012591 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000021943 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002987 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000066136 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000007360 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004480 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014970 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000032897 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012195 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000012614 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000012258 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000596 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1712 | 85.63 | 95.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3490 | 83.92 | 95.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3628 | 71.05 | 95.77 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000001483 retrocopies