Parental gene:

Nfyc, ENSMUSG00000032897

Aliases:None
Description:nuclear transcription factor-Y gamma [Source:MGI Symbol;Acc:MGI:107901]
Organism:Mouse (Mus musculus)
Coordinates:4:120757437..120831572(-)


>ENSMUSG00000032897
ATGTCCACAGAAGGAGGGTTTGGCGGTACCAGCAGCAGTGATGCCCAGCAAAGCCTCCAGTCCTTCTGGCCCAGAGTCAT
GGAAGAAATCCGAAACTTAACAGTGAAAGATTTCCGAGTACAGGAACTCCCACTGGCTCGTATTAAGAAGATTATGAAAC
TGGATGAAGATGTGAAGATGATCAGTGCAGAAGCCCCTGTGCTGTTTGCTAAGGCAGCCCAGATTTTTATCACTGAGCTG
ACTCTTCGAGCCTGGATCCACACAGAGGATAACAAGCGTCGTACTCTTCAGAGGAATGATATTGCCATGGCAATTACAAA
ATTTGATCAGTTCGACTTTCTCATCGATATTGTTCCAAGAGATGAACTGAAACCTCCAAAGCGCCAGGAGGAGGTACGCC
AGTCTGTGACTCCTGCGGAGCCTGTCCAGTACTACTTCACGCTGGCTCAGCAGCCCACTGCTGTCCAGGTCCAGGGACAG
CAGCAAGGCCAGCAGACCACCAGTTCTACGACCACCATCCAGCCTGGACAGATCATCATTGCACAGCCTCAGCAGGGTCA
GACCACACCCGTGACCATGCAGGTTGGAGAAGGTCAGCAGGTGCAGATTGTACAGGCCCAACCTCAGGGTCAGGCCCAGC
AGACCCAGAGTGGCACTGGACAGACCATGCAGGTGATGCAGCAGATCATTACCAACACAGGAGAGATCCAGCAGATCCCG
GTGCAGCTGAATGCTGGCCAGCTGCAATATATCCGATTAGCCCAGCCTGTATCAGGCACCCAAGTTGTCCAAGGACAGAT
CCAGACACTTGCTACCAATGCCCAACAGATCACACAGACAGAGGTCCAGCAAGGACAGCAGCAGTTCAGCCAGTTCACAG
ATGGACAGCAGCTGTACCAGATCCAGCAAGTCACCATGCCTGCAGGCCAAGACCTCGCCCAGCCCATGTTTATTCAGTCA
GCCAATCAGCCCTCTGATGGGCAGACCCCCCAGGTGACTGGAGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 17 .22 RPM
SRP007412_cerebellum 27 .53 RPM
SRP007412_heart 21 .23 RPM
SRP007412_kidney 27 .93 RPM
SRP007412_liver 7 .95 RPM
SRP007412_testis 7 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012591 ortholog_one2many 1 retrogene
retro_acar_33,
Bos taurus ENSBTAG00000021943 ortholog_one2one 1 retrogene
retro_btau_1338,
Callithrix jacchus ENSCJAG00000002987 possible_ortholog 1 retrogene
retro_cjac_4050,
Homo sapiens ENSG00000066136 ortholog_one2one 2 retrogenes
retro_hsap_4280, retro_hsap_4668,
Gorilla gorilla ENSGGOG00000007360 ortholog_one2one 2 retrogenes
retro_ggor_2865, retro_ggor_2896,
Macropus eugenii ENSMEUG00000004480 ortholog_one2one 1 retrogene
retro_meug_1145,
Macaca mulatta ENSMMUG00000014970 ortholog_one2one 2 retrogenes
retro_mmul_1202, retro_mmul_2485,
Otolemur garnettii ENSOGAG00000012614 ortholog_one2one 2 retrogenes
retro_ogar_2147, retro_ogar_411,
Pongo abelii ENSPPYG00000001483 ortholog_one2one 3 retrogenes
retro_pabe_1712, retro_pabe_3490, retro_pabe_3628,
Pan troglodytes ENSPTRG00000000596 ortholog_one2one 2 retrogenes
retro_ptro_2903, retro_ptro_3102,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_844 98.81 100.00
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Download FASTA sequences of all ENSMUSG00000032897 retrocopies