Parental gene: | TRIM28, ENSPCAG00000007149 |
| Aliases: | None |
| Description: | tripartite motif containing 28 [Source:HGNC Symbol;Acc:16384] |
| Organism: | Hyrax (Procavia capensis) |
| Coordinates: | scaffold_47051:6470..11677(-) |
>ENSPCAG00000007149
GTGGATTGTCCTGTCTGCAAACAGCAATGCTTCTACAAAGACATTGTGGAGAACTACTTCATGCGTGATAGTGGTAGCAA
GACTGCCACCGACGCCCAGGATGCTAATCAGTGCTGCACCAGCTGTGAGGATAACGCTCCTGCCACTAGCTACTGCGTTG
AGTGCTCCGAACCGTTGTGTGAGACTTGCGTGGAGGCACACCAGCGAGTGAAGTACACCAAGGACCACACCGTGCGATCC
ACCGGGCCAGCGAAGACACGAGATGGCGAGCGCACTGTGTATTGCAGTGTACATAAGCATGAGCCACTTGTGCTGTTTTG
TGAGAGTTGTGACACTCTGACCTGCCGGGACTGCCAGCTCAATGCCCACAAGGACCATCAGTACCAGTTCCTGGAGGATG
CAGTGAGGAACCAGCGCAAACTCCTAGCCTCGTTGGTGAAGCGCCTTGGGGACAAGCATGCCACATTGCAGAAGAGCACC
AAGGAGGTTCGCAGCATTCGTCATGTGTCAGATGTCCAGAAGCGTGTGCAGGTGGATGTCAAGATGGCCATCCTGCAGAT
CATGAAAGAGTTGAACAAACGGGGCCGTGTGCTGGTCAATGATGCCCAGAAGGTGACTGAGGGGCAGCAGGAGCGGCTGG
AGCGCCAGCACTGGACCATGACCAAGATCCAGAAACACCAGGAACACATCTTGCGTTTTGCCTCTTGGGCCCTGGAAAGT
GACAATAACACAGCCCTGCTGCTCTCCAAGAAGCTGATCTACTTCCAGCTGCACCGTGCCCTCAAGATGATTGTGGACCC
CGTGGAGCCTCATGGCGAGATGAAATTCCAGTGGGACCTCAATGCTTGGACCAAGAGTGCTGAGGCCTTTGGCAAGATCG
TGGCAGAGCGCTCGGGCACCAACTCTACAGGGCCTGCACCCATGGCCCCCCCGCGGGCCCCTGGCCCACTGAGCAAGCAG
GGCTCAGGCAGCAGCCAGCCCATGGAGGTACAAGAAGGCTACGGCTTTGGGTCAGTAGATGACCCCTACTCGAGTGCGGA
GCCTCATGTATCGGGTGTGAAGCGATCCCGCTCTGGTGAGGGTGAAGTGAGTGGCCTCATGCGCAAGGTACCACGGGTGA
GTCTTGAGCGCCTGGACTTGGACCTCACAGCTGACAGCCAGCCACCTGTATTCAAGGTGTTCCCAGGCAACACCACAGAG
GACTACAATCTCATTGTCATTGAACGTGGTGGTGCTGCTGCTGCGGCTGCAGGACAGCCAGGAACTGCGCCCCCTGGGGC
CCCTGGAGCCCCGCCCTTGCCTGGCATGGCCATTGTCAAGGAAGAAGAGACAGAGGCAGCCATTGGAGCACCACCTGCAG
CTGCAGAAGGCCCTGAGACCAAGCCTGTGCTTATGGCCCTGGCAGAGGGTCCTGGTGCAGAGGGCCCCCGCTTGGCCTCA
CCCAGTGGTAGCACCAGCTCAGGCCTGGAGGTGGTGGCCCCTGAAGGTGCCTCAGCCCCATCAGGTGGTCCAGGCACCCT
GGATGACAGTGCCACCATTTGTCGCGTCTGCCAGAAGCCAGGTGACCTGGTCATGTGCAACCAGTGCGAGTTTTGCTTCC
ACCTGGACTGTCACCTGCCAGCTCTGCAAGATGTGCCAGGGGAAGAGTGGAGCTGTTCACTCTGCCATGTGCTCCCTGAC
CTGAAAGAGGAGGATGGGAGTCTCAATCTGGATGAGGCTGACACCACCGGTGTGGTGGCCAAGCTTTCACCAGCCAACCA
GCGGAAATGTGAGCGTGTCCTGCTGGCCTTGTTTTGCCACGAGCCATGCCGTCCCCTGCACCAGTTGGCCACTGATTCCA
CCTTCTCCCTGGACCAGCCTGGTGGTACTTTAGACTTGACGCTGATTCGTGCCCGTCTCCAGGAGAAATTGTCTCCTCCC
TATAGCTCCCCCCAGGAATTTGCCCAGGATGTGGGCCGCATGTTCAAGCAGTTCAACAAACTGACAGAGGACAAGGCTGA
TGTGCAGTCCATCATCGGCCTGCAACGGTTTTTTGAGACACGCATGAATGAAGCCTTTGGCGACACCAAGTTCTCAGCTG
TGCTGGTCGAGCCCCCGCCGCTGAGCCTACCTGGTGCTGGCCTGGGGGCCCCGGAGCTGCCCGGTGGCCCCAGTGATGGT
CTCTGA
GTGGATTGTCCTGTCTGCAAACAGCAATGCTTCTACAAAGACATTGTGGAGAACTACTTCATGCGTGATAGTGGTAGCAA
GACTGCCACCGACGCCCAGGATGCTAATCAGTGCTGCACCAGCTGTGAGGATAACGCTCCTGCCACTAGCTACTGCGTTG
AGTGCTCCGAACCGTTGTGTGAGACTTGCGTGGAGGCACACCAGCGAGTGAAGTACACCAAGGACCACACCGTGCGATCC
ACCGGGCCAGCGAAGACACGAGATGGCGAGCGCACTGTGTATTGCAGTGTACATAAGCATGAGCCACTTGTGCTGTTTTG
TGAGAGTTGTGACACTCTGACCTGCCGGGACTGCCAGCTCAATGCCCACAAGGACCATCAGTACCAGTTCCTGGAGGATG
CAGTGAGGAACCAGCGCAAACTCCTAGCCTCGTTGGTGAAGCGCCTTGGGGACAAGCATGCCACATTGCAGAAGAGCACC
AAGGAGGTTCGCAGCATTCGTCATGTGTCAGATGTCCAGAAGCGTGTGCAGGTGGATGTCAAGATGGCCATCCTGCAGAT
CATGAAAGAGTTGAACAAACGGGGCCGTGTGCTGGTCAATGATGCCCAGAAGGTGACTGAGGGGCAGCAGGAGCGGCTGG
AGCGCCAGCACTGGACCATGACCAAGATCCAGAAACACCAGGAACACATCTTGCGTTTTGCCTCTTGGGCCCTGGAAAGT
GACAATAACACAGCCCTGCTGCTCTCCAAGAAGCTGATCTACTTCCAGCTGCACCGTGCCCTCAAGATGATTGTGGACCC
CGTGGAGCCTCATGGCGAGATGAAATTCCAGTGGGACCTCAATGCTTGGACCAAGAGTGCTGAGGCCTTTGGCAAGATCG
TGGCAGAGCGCTCGGGCACCAACTCTACAGGGCCTGCACCCATGGCCCCCCCGCGGGCCCCTGGCCCACTGAGCAAGCAG
GGCTCAGGCAGCAGCCAGCCCATGGAGGTACAAGAAGGCTACGGCTTTGGGTCAGTAGATGACCCCTACTCGAGTGCGGA
GCCTCATGTATCGGGTGTGAAGCGATCCCGCTCTGGTGAGGGTGAAGTGAGTGGCCTCATGCGCAAGGTACCACGGGTGA
GTCTTGAGCGCCTGGACTTGGACCTCACAGCTGACAGCCAGCCACCTGTATTCAAGGTGTTCCCAGGCAACACCACAGAG
GACTACAATCTCATTGTCATTGAACGTGGTGGTGCTGCTGCTGCGGCTGCAGGACAGCCAGGAACTGCGCCCCCTGGGGC
CCCTGGAGCCCCGCCCTTGCCTGGCATGGCCATTGTCAAGGAAGAAGAGACAGAGGCAGCCATTGGAGCACCACCTGCAG
CTGCAGAAGGCCCTGAGACCAAGCCTGTGCTTATGGCCCTGGCAGAGGGTCCTGGTGCAGAGGGCCCCCGCTTGGCCTCA
CCCAGTGGTAGCACCAGCTCAGGCCTGGAGGTGGTGGCCCCTGAAGGTGCCTCAGCCCCATCAGGTGGTCCAGGCACCCT
GGATGACAGTGCCACCATTTGTCGCGTCTGCCAGAAGCCAGGTGACCTGGTCATGTGCAACCAGTGCGAGTTTTGCTTCC
ACCTGGACTGTCACCTGCCAGCTCTGCAAGATGTGCCAGGGGAAGAGTGGAGCTGTTCACTCTGCCATGTGCTCCCTGAC
CTGAAAGAGGAGGATGGGAGTCTCAATCTGGATGAGGCTGACACCACCGGTGTGGTGGCCAAGCTTTCACCAGCCAACCA
GCGGAAATGTGAGCGTGTCCTGCTGGCCTTGTTTTGCCACGAGCCATGCCGTCCCCTGCACCAGTTGGCCACTGATTCCA
CCTTCTCCCTGGACCAGCCTGGTGGTACTTTAGACTTGACGCTGATTCGTGCCCGTCTCCAGGAGAAATTGTCTCCTCCC
TATAGCTCCCCCCAGGAATTTGCCCAGGATGTGGGCCGCATGTTCAAGCAGTTCAACAAACTGACAGAGGACAAGGCTGA
TGTGCAGTCCATCATCGGCCTGCAACGGTTTTTTGAGACACGCATGAATGAAGCCTTTGGCGACACCAAGTTCTCAGCTG
TGCTGGTCGAGCCCCCGCCGCTGAGCCTACCTGGTGCTGGCCTGGGGGCCCCGGAGCTGCCCGGTGGCCCCAGTGATGGT
CTCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005745 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000027487 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pcap_462 | 92.01 | 70.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPCAG00000007149 retrocopies