Parental gene: | ENSOPRG00000018613 |
| Aliases: | None |
| Description: | None |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | scaffold_9104:34015..40909(+) |
>ENSOPRG00000018613
ATGTCCCGCTACCTGCGCCCCCCGAACACGTCTCTGTTCGTCAGGAACGTGGCGGACGACACCAGGTCTGAAGATCTGCG
GCGCGAGTTCGGTCGCTACGGGCCTATAGTTGATGTGTACGTTCCACTTGATTTCTACACTCGCCGACCAAGAGGATTTG
CTTATGTTCAATTTGAGGATGTTCGTGATGCTGAAGATGCTTTACATAATCTGGACAGAAAATGGATTTGCGGTCGTCAG
ATTGAAATACAGTTTGCACAGGGGGACCGGAAGACACCAAATCAAATGAAAGCCAAGGAAGGGAGAAATGTGTACAGTTC
TTCACGTTACGATGATTATGACAGATATAGACGTTCCAGAAGCCGAAGTTATGAAAGGAGGAGATCAAGAAGTCGGTCTT
TTGATTACAACTATAGAAGATCTTATAGTCCTAGAAACAGTAGACCGACGGGAAGACCTCGCCGTAGCAGGAGCCATTCC
GACAATGATAGATTCAAACACCGAAATCGATCTTTTTCAAGATCTAAATCCAATTCAAGATCACGGTCCAAGTCCCAGCC
CAAGAAAGAAATGAAGGCTAAATCACGTTCTAGGTCTGCATCTCACACCAAAAGTAGAGGCACCTCTAAAACAGATTCCA
AAACACATTATAAGTCTGGCTCAAGAGATGAAAAGGAATCAAGGAAAAAAGAACCACCTAGATCCAAATCTCAGTCAAGA
TCACAGTCTAGGTCTAGGTCCAAATCTAGATCAAGGTCTTGGACTAGTCCTAAGTCCAGTGGCCACTGA
ATGTCCCGCTACCTGCGCCCCCCGAACACGTCTCTGTTCGTCAGGAACGTGGCGGACGACACCAGGTCTGAAGATCTGCG
GCGCGAGTTCGGTCGCTACGGGCCTATAGTTGATGTGTACGTTCCACTTGATTTCTACACTCGCCGACCAAGAGGATTTG
CTTATGTTCAATTTGAGGATGTTCGTGATGCTGAAGATGCTTTACATAATCTGGACAGAAAATGGATTTGCGGTCGTCAG
ATTGAAATACAGTTTGCACAGGGGGACCGGAAGACACCAAATCAAATGAAAGCCAAGGAAGGGAGAAATGTGTACAGTTC
TTCACGTTACGATGATTATGACAGATATAGACGTTCCAGAAGCCGAAGTTATGAAAGGAGGAGATCAAGAAGTCGGTCTT
TTGATTACAACTATAGAAGATCTTATAGTCCTAGAAACAGTAGACCGACGGGAAGACCTCGCCGTAGCAGGAGCCATTCC
GACAATGATAGATTCAAACACCGAAATCGATCTTTTTCAAGATCTAAATCCAATTCAAGATCACGGTCCAAGTCCCAGCC
CAAGAAAGAAATGAAGGCTAAATCACGTTCTAGGTCTGCATCTCACACCAAAAGTAGAGGCACCTCTAAAACAGATTCCA
AAACACATTATAAGTCTGGCTCAAGAGATGAAAAGGAATCAAGGAAAAAAGAACCACCTAGATCCAAATCTCAGTCAAGA
TCACAGTCTAGGTCTAGGTCCAAATCTAGATCAAGGTCTTGGACTAGTCCTAAGTCCAGTGGCCACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004836 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020883 | possible_ortholog | 9 retrogenes | |
| Cavia porcellus | ENSCPOG00000024533 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000008699 | possible_ortholog | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000014286 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000188529 | possible_ortholog | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000026905 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000028520 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000028676 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000024234 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_295 | 85.94 | 97.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_916 | 64.02 | 70.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_1067 | 85.94 | 97.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000018613 retrocopies