Parental gene:

GABPA, ENSOPRG00000009283

Aliases:None
Description:GA binding protein transcription factor, alpha subunit 60kDa [Source:HGNC Symbol;Acc:4071]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_3126:237654..331438(+)


>ENSOPRG00000009283
ATGACTAAGAGAGAAGCTGAGGAGCTGATAGAGATTGAGATTGATGGGACAGAGAAATCAGAGTGCACAGAAGAAAGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGATCCAGAGCGAAGT
TTATTTGACCAAGGAGTAAAGACAGATGGAACTGTACAGCTTAGTGTACAGGTAATTTCTTACCAAGGAATTGAGCCGAA
GCTGAACATCCTTGAAATTGTTAAAACTGCGGAAACTGTTGAAGTGGTCATTGATCCCGATGCTCACCATGCTGAAGCTG
AGGCACATCTTGTTGAGGAAGCTCAGGTGATAACCCTGGACGGCACCAAGCATATCACCACCATTTCAGATGAAACCTCA
GAGCAGGTGACGAGATGGGCTGCCGCGCTGGAAGGTTACAGGAAGGAACAAGAACGCCTCGGGATACCCTATGATCCTAT
ACAGTGGTCCACAGACCAAGTCCTACATTGGGTGGTTTGGGTCATGAAGGAATTCAGCATGACTGACATAGATCTCACCA
CACTCAACATTTCCGGAAGAGAATTATGTAGCCTCAGCCAAGAAGATTTTTTTCAACGAGTCCCTCGGGGAGAGATTCTT
TGGAGTCATCTGGAGCTTCTTCGAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCTGTGCAAATTATTCCCGCTTCAGTGCAGTCAGCCACACCCACTGCCATTAAAGTCCTGAACAGCAGTGCCAAAGCAG
CCAAAGTCCAGAGGGCTCCACGGATTTCAGGAGAAGACAGGAGCTCACCTGGGAACAGAACAGGAAACAATGGACAGATC
CAGCTGTGGCAGTTTTTGCTAGAACTCCTTACTGACAAAGATGCCCGAGACTGTATTTCATGGGTTGGTGATGAAGGTGA
ATTTAAACTAAATCAACCTGAGCTGGTTGCTCAGAAATGGGGACAGCGTAAAAATAAGCCTACAATGAACTATGAGAAAC
TCAGTCGTGCATTA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013817 ortholog_one2one 1 retrogene
retro_cjac_2487,
Dasypus novemcinctus ENSDNOG00000016059 ortholog_one2one 1 retrogene
retro_dnov_476,
Homo sapiens ENSG00000154727 ortholog_one2one 1 retrogene
retro_hsap_3737,
Pan troglodytes ENSPTRG00000013810 ortholog_one2one 1 retrogene
retro_ptro_2536,
Tursiops truncatus ENSTTRG00000004785 ortholog_one2one 1 retrogene
retro_ttru_154,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_1174 90.46 74.87
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Download FASTA sequences of all ENSOPRG00000009283 retrocopies