Parental gene:

GABPA, ENSG00000154727

Aliases:GABPA, E4TF1-60, E4TF1A, NFT2, NRF2, NRF2A, RCH04A07
Description:GA binding protein transcription factor, alpha subunit 60kDa [Source:HGNC Symbol;Acc:4071]
Organism:Human (Homo sapiens)
Coordinates:21:27106880..27144771(+)


>ENSG00000154727
ATGACTAAAAGAGAAGCAGAGGAGCTGATAGAAATTGAGATTGATGGAACAGAGAAAGCAGAGTGCACAGAAGAAAGCAT
TGTAGAACAAACCTACGCGCCAGCTGAATGTGTAAGCCAGGCCATAGACATCAATGAACCAATAGGCAATTTAAAGAAAC
TGCTAGAACCAAGACTACAGTGTTCTTTGGATGCTCATGAAATTTGTCTGCAAGATATCCAGCTGGATCCAGAACGAAGT
TTATTTGACCAAGGAGTAAAAACAGATGGAACTGTACAGCTTAGTGTACAGGTAATTTCTTACCAAGGAATTGAACCAAA
GTTAAACATCCTTGAAATTGTTAAACCTGCGGACACTGTTGAGGTTGTTATTGATCCAGATGCCCACCATGCTGAATCAG
AAGCACATCTTGTTGAAGAAGCTCAAGTGATAACTCTTGATGGCACAAAACACATCACAACCATTTCAGATGAAACTTCA
GAACAAGTGACAAGATGGGCTGCTGCACTGGAAGGCTATAGGAAAGAACAAGAACGCCTTGGGATACCCTATGATCCCAT
ACAGTGGTCCACAGACCAAGTCCTGCATTGGGTGGTTTGGGTAATGAAGGAATTCAGCATGACCGATATAGACCTCACCA
CACTCAACATTTCGGGGAGAGAATTATGTAGTCTCAACCAAGAAGATTTTTTTCAGCGGGTTCCTCGGGGAGAAATTCTC
TGGAGTCATCTGGAACTTCTCCGAAAATATGTATTGGCAAGTCAAGAACAACAGATGAATGAAATAGTTACAATTGATCA
ACCTGTGCAAATTATTCCAGCATCAGTGCAATCTGCTACACCTACTACCATTAAAGTTATAAATAGTAGTGCGAAAGCAG
CCAAAGTACAAAGAGCGCCGAGGATTTCAGGAGAAGATAGAAGCTCACCTGGGAACAGAACAGGAAACAATGGCCAAATC
CAACTATGGCAGTTTTTGCTAGAACTTCTTACTGATAAGGACGCTCGAGACTGCATTTCTTGGGTTGGTGATGAAGGTGA
ATTTAAGCTAAATCAGCCTGAACTGGTTGCACAGAAATGGGGACAGCGTAAAAATAAGCCTACGATGAACTATGAGAAAC
TCAGTCGTGCATTAAGATATTATTACGATGGGGACATGATTTGTAAAGTTCAAGGCAAGAGATTTGTGTACAAGTTTGTC
TGTGACTTGAAGACTCTTATTGGATACAGTGCAGCGGAGTTGAACCGTTTGGTCACAGAATGTGAACAGAAGAAACTTGC
AAAGATGCAGCTCCATGGAATTGCCCAGCCAGTCACAGCAGTAGCTCTGGCTACTGCTTCTCTGCAAACGGAAAAGGATA
ATTGA

Library Parental gene expression (RPM)
bodymap2_liver 24 .23 RPM
bodymap2_lung 37 .57 RPM
bodymap2_breast 60 .41 RPM
bodymap2_adipose 53 .75 RPM
bodymap2_adrenal 59 .57 RPM
bodymap2_skeletal_muscle 27 .21 RPM
bodymap2_thyroid 67 .64 RPM
bodymap2_prostate 59 .46 RPM
bodymap2_colon 60 .31 RPM
bodymap2_testis 84 .10 RPM
bodymap2_brain 26 .28 RPM
bodymap2_heart 33 .43 RPM
bodymap2_white_blood_cells 83 .54 RPM
bodymap2_lymph_node 51 .15 RPM
bodymap2_ovary 68 .61 RPM
bodymap2_kidney 49 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013817 ortholog_one2one 1 retrogene
retro_cjac_2487,
Dasypus novemcinctus ENSDNOG00000016059 ortholog_one2one 1 retrogene
retro_dnov_476,
Homo sapiens ENSG00000126767 within_species_paralog 2 retrogenes
retro_hsap_1465, retro_hsap_1466,
Ochotona princeps ENSOPRG00000009283 ortholog_one2one 1 retrogene
retro_opri_1174,
Pan troglodytes ENSPTRG00000013810 ortholog_one2one 1 retrogene
retro_ptro_2536,
Tursiops truncatus ENSTTRG00000004785 ortholog_one2one 1 retrogene
retro_ttru_154,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3737 98.45 99.78
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000154727 retrocopies