Parental gene: | PRPF3, ENSOGAG00000005352 |
| Aliases: | None |
| Description: | pre-mRNA processing factor 3 [Source:HGNC Symbol;Acc:17348] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873693.1:2813788..2849110(-) |
>ENSOGAG00000005352
ATGGCACTGTCTAAGAGGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACAGTGAAGAGAGTATTGGGTTTCTCAGA
GCCCACAGTGGTAACGGCGGCACTGAACTGTGTGGGGAAGGGCATGGACAAGAAGAAGGCAGCTGACCATCTGAAACCTT
TTCTTGACGATTCTACTCTCCGATTTGTGGACAAACTATTTGAGGCTGTGGAGGAGGGCCGAAGCTCTAGGCATTCCAAG
TCTAGCAGTGATAGGAGCAGAAAACGAGAACTAAAGGAGGTGTTTGGTGATGACTCTGAGATTGCCAAAGAATCTTCGGG
AGTAAAGAAGCGACGAATACCCCGTTTTGAGGAGGTAGAAGAAGAGCCAGAGGTGATCCCTGGTCCTCCATCAGAGAGCC
CGGGCATGCTAACTAAGCTCCAGATCAAACAGATGATGGAAGCAGCAACACGACAAATTGAGGAGAGAAAAAAACAACTG
AGCTTCATTAGCCCCCCTACACCTCAGCCAAAGACTCCTTCCTCCTCCCAGCCAGAGCGACTTCCAATTGGCAACACTAT
TCAGCCCTCCCAGGCTGCCACTTTTATGAATGATGCTATTGAGAAAGCAAGGAAAGCAGCTGAACTACAAGCTCGAATCC
AAGCCCAGCTGGCACTGAAGCCAGGACTCATTGGCAATGCCAACATGGTGGGCCTGGCTAATCTCCATGCTATGGGTATT
GCTCCCCCGAAAGTGGAGTTAAAAGATCAAACTAAACCTACACCACTGATCCTAGATGAACAGGGTCGCACTGTAGATGC
AACAGGCAAGGAGATTGAGCTGACGCATCGCATGCCTACTCTTAAGGCCAATATTCGTGCTGTGAAAAGGGAACAATTCA
AGCAACAACTAAAAGAAAAGCCATCAGAAGATATGGAGTCCAATACGTTTTTTGACCCCCGAGTTTCCATTGCCCCTTCC
CAACGCCAGAGACGAACTTTTAAATTCCATGACAAAGGCAAATTTGAGAAGATTGCTCAGCGATTACGGACCAAGGCACA
TAATCATAAGATGGAGGCAGAACTGGCCCAGGCCAGTAGAGATGGGGCCATTCACCCAGGAACATATTGGTACTTGATAC
CTATCAAGTTTGTTAGTATAGAAATAATTGAAAATGACTGGGTTCAAACCTGGCCCTGGCCAAATGGCAATTTTAGTACA
GAGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACGAATCTTGTTGAACATCCAGCCCAGCTTAATCCTCCAGCCAC
TAACCNTGACACACCAGTTACTCTGGGGGTGTATCTTACCAAGAAGGAACAGAAGAAACTTCGGAGGCAGACAAGGAGAG
AAGCACAGAAAGAACTACAAGAGAAAGTCAGGCTGGGCCTGATGCCTCCTCCAGAACCCAAAGTGAGAATTTCTAATCTG
ATGCGAGTATTAGGCACAGAAGCTGTTCAAGACCCCACGAAGGTAGAAGCCCATGTCAAAGCTCAAATGGCAAAAAGACA
GAAAGCGCATGAAGAGGCCAACGCTGCCCGAAAACTTACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAG
AAGACATTTCACAGGGGGTACACATATCTGTATATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAG
GCCAATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCACAAGGATGTCAACGTGGTAGTAGTGGAAGGGGGCCC
CAAAGCCCAGAAGAAATTTAAGCGTCTTATGCTGCATCGGATAAAGTGGGATGAACAGACATCTAACACAAAGGGAGATG
ATGATGAGGAATCTGATGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCGG
AGCTTTGGAGAGATGAAGTTCAAACAGTGCCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAACA
CTACTGGGACCTTGCACTGAGTGAATCTGTGTTAGAGTCCACTGACTGA
ATGGCACTGTCTAAGAGGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACAGTGAAGAGAGTATTGGGTTTCTCAGA
GCCCACAGTGGTAACGGCGGCACTGAACTGTGTGGGGAAGGGCATGGACAAGAAGAAGGCAGCTGACCATCTGAAACCTT
TTCTTGACGATTCTACTCTCCGATTTGTGGACAAACTATTTGAGGCTGTGGAGGAGGGCCGAAGCTCTAGGCATTCCAAG
TCTAGCAGTGATAGGAGCAGAAAACGAGAACTAAAGGAGGTGTTTGGTGATGACTCTGAGATTGCCAAAGAATCTTCGGG
AGTAAAGAAGCGACGAATACCCCGTTTTGAGGAGGTAGAAGAAGAGCCAGAGGTGATCCCTGGTCCTCCATCAGAGAGCC
CGGGCATGCTAACTAAGCTCCAGATCAAACAGATGATGGAAGCAGCAACACGACAAATTGAGGAGAGAAAAAAACAACTG
AGCTTCATTAGCCCCCCTACACCTCAGCCAAAGACTCCTTCCTCCTCCCAGCCAGAGCGACTTCCAATTGGCAACACTAT
TCAGCCCTCCCAGGCTGCCACTTTTATGAATGATGCTATTGAGAAAGCAAGGAAAGCAGCTGAACTACAAGCTCGAATCC
AAGCCCAGCTGGCACTGAAGCCAGGACTCATTGGCAATGCCAACATGGTGGGCCTGGCTAATCTCCATGCTATGGGTATT
GCTCCCCCGAAAGTGGAGTTAAAAGATCAAACTAAACCTACACCACTGATCCTAGATGAACAGGGTCGCACTGTAGATGC
AACAGGCAAGGAGATTGAGCTGACGCATCGCATGCCTACTCTTAAGGCCAATATTCGTGCTGTGAAAAGGGAACAATTCA
AGCAACAACTAAAAGAAAAGCCATCAGAAGATATGGAGTCCAATACGTTTTTTGACCCCCGAGTTTCCATTGCCCCTTCC
CAACGCCAGAGACGAACTTTTAAATTCCATGACAAAGGCAAATTTGAGAAGATTGCTCAGCGATTACGGACCAAGGCACA
TAATCATAAGATGGAGGCAGAACTGGCCCAGGCCAGTAGAGATGGGGCCATTCACCCAGGAACATATTGGTACTTGATAC
CTATCAAGTTTGTTAGTATAGAAATAATTGAAAATGACTGGGTTCAAACCTGGCCCTGGCCAAATGGCAATTTTAGTACA
GAGGAAAATCCCAAGAGAGAAGATTATTTTGGAATCACGAATCTTGTTGAACATCCAGCCCAGCTTAATCCTCCAGCCAC
TAACCNTGACACACCAGTTACTCTGGGGGTGTATCTTACCAAGAAGGAACAGAAGAAACTTCGGAGGCAGACAAGGAGAG
AAGCACAGAAAGAACTACAAGAGAAAGTCAGGCTGGGCCTGATGCCTCCTCCAGAACCCAAAGTGAGAATTTCTAATCTG
ATGCGAGTATTAGGCACAGAAGCTGTTCAAGACCCCACGAAGGTAGAAGCCCATGTCAAAGCTCAAATGGCAAAAAGACA
GAAAGCGCATGAAGAGGCCAACGCTGCCCGAAAACTTACAGCAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAG
AAGACATTTCACAGGGGGTACACATATCTGTATATAGAGTTCGAAATTTGAGCAACCCAGCCAAGAAGTTCAAGATTGAG
GCCAATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACTGCACAAGGATGTCAACGTGGTAGTAGTGGAAGGGGGCCC
CAAAGCCCAGAAGAAATTTAAGCGTCTTATGCTGCATCGGATAAAGTGGGATGAACAGACATCTAACACAAAGGGAGATG
ATGATGAGGAATCTGATGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCGG
AGCTTTGGAGAGATGAAGTTCAAACAGTGCCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAACA
CTACTGGGACCTTGCACTGAGTGAATCTGTGTTAGAGTCCACTGACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009926 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016301 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009841 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001254 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_374 | 79.05 | 52.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_409 | 86.84 | 99.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_2360 | 83.16 | 54.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ogar_3052 | 85.53 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000005352 retrocopies