Parental gene:

NME2, ENSOCUG00000024946

Aliases:None
Description:NME/NM23 nucleoside diphosphate kinase 2 (NME2), mRNA [Source:RefSeq mRNA;Acc:NM_001204750]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:36641171..36647189(-)


>ENSOCUG00000024946
ATGGCCCACCTGGAGCGCACCTTCATCGCCATCAAGCCAGACGGCGTGCAGCGCGGCCTGGTGGGAGAAATCATCAAGCG
CTTTGAGCAGAAGGGATTCCGCCTGGTGGCCATGAAGTTCCTTCGGGCCTCCGAGGAGCACCTGAAGCAGCACTACATCG
ACCTGAAAGACCGCCCGTTCTTCCCGGGGCTGGTGAAGTACATGAACTCGGGGCCGGTCGTGGCCATGGTCTGGGAGGGG
CTGAACGTGGTGAAGACAGGCCGAGTGATGCTCGGCGAGACCAACCCTGCGGACTCCAAGCCGGGCACCATCCGCGGGGA
CTTCTGCATCCAGGTTGGCAGGAACATCATTCATGGCAGCGACTCAGTGAAAAGTGCGGAAAAGGAAATAAGCCTGTGGT
TCCAGCCTGAAGAACTGGTTGACTACAAGTCTTGTGCTCACGACTGGGTCTATGAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 46 .71 RPM
SRP017611_kidney 172 .71 RPM
SRP017611_brain 68 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008022 possible_ortholog 3 retrogenes
retro_amel_1573, retro_amel_390, retro_amel_538,
Erinaceus europaeus ENSEEUG00000003783 possible_ortholog 2 retrogenes
retro_eeur_156, retro_eeur_5,
Homo sapiens ENSG00000011052 possible_ortholog 1 retrogene
retro_hsap_1063,
Myotis lucifugus ENSMLUG00000016929 possible_ortholog 3 retrogenes
retro_mluc_1422, retro_mluc_1882, retro_mluc_637,
Mus musculus ENSMUSG00000020857 ortholog_one2one 1 retrogene
retro_mmus_221,
Oryctolagus cuniculus ENSOCUG00000022135 within_species_paralog 1 retrogene
retro_ocun_1728,
Rattus norvegicus ENSRNOG00000002671 ortholog_one2many 8 retrogenes
retro_rnor_1129, retro_rnor_1610, retro_rnor_1708, retro_rnor_1784, retro_rnor_1966, retro_rnor_2646, retro_rnor_2951, retro_rnor_628,
Sarcophilus harrisii ENSSHAG00000014470 ortholog_one2one 3 retrogenes
retro_shar_130, retro_shar_554, retro_shar_781,
Sus scrofa ENSSSCG00000017591 possible_ortholog 1 retrogene
retro_sscr_854,
Tupaia belangeri ENSTBEG00000013053 possible_ortholog 6 retrogenes
retro_tbel_1271, retro_tbel_1386, retro_tbel_2497, retro_tbel_294, retro_tbel_4620, retro_tbel_820,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_418 89.47 100.00
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Download FASTA sequences of all ENSOCUG00000024946 retrocopies