Parental gene:

TATDN1, ENSOCUG00000017403

Aliases:None
Description:TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:24220]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:3:140226219..140273442(-)


>ENSOCUG00000017403
ATGAGTCGCTTCAAGTTTGTCGATATTGGTATCAACCTGACAGATCCTATGTTCAGAGGAATTTATAGGGGGGTTCAAAA
GCATCAAGATGACTTACAGGATGTGATAGAGAGAGCTGTCCAAATTGGTGTGAAGAAGTTTATGATTACAGGTGGAAATC
TACAAGACAGTAAAGATGCACTGCATTTGGCACAAACAAATGATATGTTTTTCAGTACAGTTGGATGTCATCCTACAAGA
TGTGATGAATTTGAAAAGAATAACCCTGATCTTTACTTAACGGAGCTGCTAAATCTTGCTGAAAACAATAAGGGAAAAGT
TGTAGCCATAGGTGAATGTGGACTTGATTTTGACCGACTGGAATTTTGTCCCAAAGAGACTCAGCTCAAATATTTTGAAA
AACAATTTGAATTGTCAGAACGAACAAAATTGCCAATGTTCCTTCATTGTCGAAACTCACATGCTGAATTTTTAGACATA
ATGAAAAGAAACAGGGATCGGTGTGTAGGCGGAGTGGTGCATTCGTTTGATGGGACCAAGGAAGCTGCAGCTGCTCTGAT
TGACTTGGATCTGTACATAGGTTTTAATGGTTGCTCACTGAAAACTGAGGCTAATTTGGAAGTTTTGAAGTCAATACCTA
CTGAAAAATTGATGATTGAGACAGATGCGCCTTGGTGTGGTGTCAAAAGTACACACGCTGGATCAAAATTTATAAAAACC
TCATTTCCCACAAAAAAGAAGTGGGAAAATGGACATTGCGTAAAAGACAGAAATGAACCCTGCCATATAATTCAAATACT
GGAGATAATGTCGGCGGTAAGAGATGAGGACCCGCTGGAATTAGCCAATACACTATATAACAACACCATTAAAATATTTT
TTCCTGATATTTAA

Library Parental gene expression (RPM)
SRP017611_liver 10 .87 RPM
SRP017611_kidney 17 .74 RPM
SRP017611_brain 18 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000033446 ortholog_one2one 1 retrogene
retro_btau_463,
Homo sapiens ENSG00000147687 ortholog_one2one 1 retrogene
retro_hsap_578,
Gorilla gorilla ENSGGOG00000015875 ortholog_one2one 1 retrogene
retro_ggor_514,
Nomascus leucogenys ENSNLEG00000005467 ortholog_one2one 1 retrogene
retro_nleu_804,
Rattus norvegicus ENSRNOG00000047198 ortholog_one2one 1 retrogene
retro_rnor_1737,
Tupaia belangeri ENSTBEG00000006179 ortholog_one2one 1 retrogene
retro_tbel_707,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_730 70.24 54.88
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Download FASTA sequences of all ENSOCUG00000017403 retrocopies