Parental gene: | ERGIC2, ENSOCUG00000017255 |
| Aliases: | None |
| Description: | ERGIC and golgi 2 [Source:HGNC Symbol;Acc:30208] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 8:10996479..11031818(+) |
>ENSOCUG00000017255
ATGAGGCGACTGAATCGGAAAAAAACCTTAAGTTTGGTCAAAGAGTTGGACGCCTTTCCCAAGGTTCCTGACAGCTATGT
AGAGACTTCGGCCAGCGGGGGTACAGTTTCTCTGATAGCGTTTACCACTATGGCTTTATTAACAATAATGGAATTCTCAG
TGTATCAAGATACATGGATGAAGTATGAATATGAAGTAGACAAGGACTTTTCTAGCAAATTGAGAATTAATATAGATATT
ACTGTGGCCATGAAGTGTCAGTATGTTGGAGCAGATGTGTTAGATTTAGCAGAAACAATGGTTGCATCTGCAGATGGTCT
AGTTTATGAACCAGCAATATTTGATCTTTCACCACATCAAAGAGAGTGGCAGAGGATGCTGCAGCTGATTCAGAGTAGGC
TGCAAGAAGAGCATTCACTTCAAGATGTCATATTTAAAAGTGCTTTTAAAAGCCCTTCAACAGCACTTCCACCAAGGGAG
GATGACTCGCTGCAGTCTCCAGATGCGTGCAGGATTCACGGGCACCTCTATGTCAACAAAGTAGCAGGGAACTTCCACAT
AACCGTGGGCAAGGCAATTCCACATCCCCGAGGCCATGCACACTTGGCAGCTCTTGTCAACCATGACTCTTACAATTTCT
CTCACAGAATAGATCATTTGTCTTTTGGAGAACTTGTTCCGGGAATCATCAATCCTTTAGATGGAACTGAAAAAATTGCT
ATAGATCACAACCAGATGTTCCAGTATTTTATTACAATTGTGCCAACAAAGCTACATACTTATAAGATTTCAGCAGATAC
CCATCAGTTTTCTGTGACAGAAAGGGAGCGCATCATCAACCACGCTGCGGGCAGCCACGGCGTCTCGGGGATATTCATGA
AGTACGACCTCAGCTCTCTGATGGTGACAGTGACTGAGGAGCACATGCCGTTCTGGCAGTTTTTTGTGAGGCTTTGTGGC
ATAGTTGGAGGGATCTTTTCAACAACAGGAATGTTACATGGAATTGGGAAATTTATAGTTGAAATAATTTGCTGTCGTTT
CCGACTTGGATCCTCTAAGCCCGTCACTTCTGTCCCTTTTGAGGATGGCCACACAGACAACCACTTACCTCTTCTAGAAA
ACAATGCGCATTAG
ATGAGGCGACTGAATCGGAAAAAAACCTTAAGTTTGGTCAAAGAGTTGGACGCCTTTCCCAAGGTTCCTGACAGCTATGT
AGAGACTTCGGCCAGCGGGGGTACAGTTTCTCTGATAGCGTTTACCACTATGGCTTTATTAACAATAATGGAATTCTCAG
TGTATCAAGATACATGGATGAAGTATGAATATGAAGTAGACAAGGACTTTTCTAGCAAATTGAGAATTAATATAGATATT
ACTGTGGCCATGAAGTGTCAGTATGTTGGAGCAGATGTGTTAGATTTAGCAGAAACAATGGTTGCATCTGCAGATGGTCT
AGTTTATGAACCAGCAATATTTGATCTTTCACCACATCAAAGAGAGTGGCAGAGGATGCTGCAGCTGATTCAGAGTAGGC
TGCAAGAAGAGCATTCACTTCAAGATGTCATATTTAAAAGTGCTTTTAAAAGCCCTTCAACAGCACTTCCACCAAGGGAG
GATGACTCGCTGCAGTCTCCAGATGCGTGCAGGATTCACGGGCACCTCTATGTCAACAAAGTAGCAGGGAACTTCCACAT
AACCGTGGGCAAGGCAATTCCACATCCCCGAGGCCATGCACACTTGGCAGCTCTTGTCAACCATGACTCTTACAATTTCT
CTCACAGAATAGATCATTTGTCTTTTGGAGAACTTGTTCCGGGAATCATCAATCCTTTAGATGGAACTGAAAAAATTGCT
ATAGATCACAACCAGATGTTCCAGTATTTTATTACAATTGTGCCAACAAAGCTACATACTTATAAGATTTCAGCAGATAC
CCATCAGTTTTCTGTGACAGAAAGGGAGCGCATCATCAACCACGCTGCGGGCAGCCACGGCGTCTCGGGGATATTCATGA
AGTACGACCTCAGCTCTCTGATGGTGACAGTGACTGAGGAGCACATGCCGTTCTGGCAGTTTTTTGTGAGGCTTTGTGGC
ATAGTTGGAGGGATCTTTTCAACAACAGGAATGTTACATGGAATTGGGAAATTTATAGTTGAAATAATTTGCTGTCGTTT
CCGACTTGGATCCTCTAAGCCCGTCACTTCTGTCCCTTTTGAGGATGGCCACACAGACAACCACTTACCTCTTCTAGAAA
ACAATGCGCATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .40 RPM |
| SRP017611_kidney | 18 .14 RPM |
| SRP017611_brain | 15 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000015668 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000010582 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004390 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001852 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000004822 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011223 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1540 | 100.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000017255 retrocopies