Parental gene: | ENSOCUG00000016684 |
| Aliases: | None |
| Description: | None |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL018719:3894620..3909845(+) |
>ENSOCUG00000016684
ATGAAGTCCAATCCCGCCATCCAAGCTGCCATTGACCTCACAGCCGGGGCTGCAGGGGGCACAGCCTGCGTGCTGACCGG
GCAGCCTTTTGACACGATGAAGGTGAAGATGCAGACGTTCCCTGACCTGTACCGGGGCCTCAGTGACTGCTGCCTCAAGA
CCTACGCCCAGGTGGGCGTCCGCGGCTTCTACAAGGGGACCAGCCCAGCACTAATCGCCAACATCGCAGAGAACTCGGTG
CTCTTTATGTGCTACGGCTTCTGCCAGCAGGTGGTACGGAAAGTGGGGGGACTGGACAAGCAGGCAAAGCTCAGCGACCT
GCAGAACGCGGCCGCTGGGTCTTTTGCCTCTGCCTTTGCCGCGCTGGTGCTTTGCCCTACAGAGCTGGTGAAGTGCCGCC
TCCAGGCCATGCACGAGATGGAGACTTCAGGGAAGATTGTCAACAGCCAGAACACGGTTTGGTCTGTCGTGAAGAGCATC
CTTAGGAAGGATGGTCCCTTGGGCTTCTACCACGGACTCTCAAGCACTTTACTTCGAGAAGTACCAGGCTATTTCTTCTT
CTTTGGTGGCTATGAACTGAGCCGATCATTCTTTGCATCAGGGAGATCAAAGGATGAACTAGGTCCTGTGCCTTTGATGT
TAAGTGGTGGAGTTGGTGGGATTTGCCTCTGGCTTGCTGTATACCCAGTGGACTGCATTAAATCCAGAATTCAAGTTATG
TCCATGTCTGGCAAACAAGCGGGATTTACCGGGACTTTGCTAAGTGTTGTGAGGAATGAAGGAATAGCAGCCTTATATTC
TGGACTGAAACCTACTATGATTCGAGCATTTCCTGCCAATGGGGCACTATTTTTGGCCTACGAGTACAGCAGGAAGTTGA
TGATGAGCCAGTTCGAAGCATACTGA
ATGAAGTCCAATCCCGCCATCCAAGCTGCCATTGACCTCACAGCCGGGGCTGCAGGGGGCACAGCCTGCGTGCTGACCGG
GCAGCCTTTTGACACGATGAAGGTGAAGATGCAGACGTTCCCTGACCTGTACCGGGGCCTCAGTGACTGCTGCCTCAAGA
CCTACGCCCAGGTGGGCGTCCGCGGCTTCTACAAGGGGACCAGCCCAGCACTAATCGCCAACATCGCAGAGAACTCGGTG
CTCTTTATGTGCTACGGCTTCTGCCAGCAGGTGGTACGGAAAGTGGGGGGACTGGACAAGCAGGCAAAGCTCAGCGACCT
GCAGAACGCGGCCGCTGGGTCTTTTGCCTCTGCCTTTGCCGCGCTGGTGCTTTGCCCTACAGAGCTGGTGAAGTGCCGCC
TCCAGGCCATGCACGAGATGGAGACTTCAGGGAAGATTGTCAACAGCCAGAACACGGTTTGGTCTGTCGTGAAGAGCATC
CTTAGGAAGGATGGTCCCTTGGGCTTCTACCACGGACTCTCAAGCACTTTACTTCGAGAAGTACCAGGCTATTTCTTCTT
CTTTGGTGGCTATGAACTGAGCCGATCATTCTTTGCATCAGGGAGATCAAAGGATGAACTAGGTCCTGTGCCTTTGATGT
TAAGTGGTGGAGTTGGTGGGATTTGCCTCTGGCTTGCTGTATACCCAGTGGACTGCATTAAATCCAGAATTCAAGTTATG
TCCATGTCTGGCAAACAAGCGGGATTTACCGGGACTTTGCTAAGTGTTGTGAGGAATGAAGGAATAGCAGCCTTATATTC
TGGACTGAAACCTACTATGATTCGAGCATTTCCTGCCAATGGGGCACTATTTTTGGCCTACGAGTACAGCAGGAAGTTGA
TGATGAGCCAGTTCGAAGCATACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 87 .02 RPM |
| SRP017611_kidney | 9 .32 RPM |
| SRP017611_brain | 6 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011723 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000011647 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000005955 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004899 | ortholog_one2one | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000014870 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000031482 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000014616 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000011881 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000002472 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000009373 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_192 | 81.27 | 99.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1927 | 83.95 | 98.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000016684 retrocopies