Parental gene: | MESDC2, ENSOCUG00000016290 |
| Aliases: | None |
| Description: | mesoderm development candidate 2 [Source:HGNC Symbol;Acc:13520] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL018737:1797633..1807022(+) |
>ENSOCUG00000016290
ATGGCGGCCTCCAGCTGGGCTCGCAAGGCCGTGGTCCTGCTTTGTGCGTCCGACCTGCTGCTGCTGTTGCTGCTGCTGCC
GCCGCCGAGAGCCTCCGCGGCCGAGGGCCCGGCGGGGACACCTGGCGAGGCTAGTGCCCCTCCTCGGAAGAAGAAGAAAG
ACATCCGCGATTACAATGACGCGGACATGGCGCGGCTCCTGGAGCAGTGGGAGAAAGATGATGACATTGAGGAAGGGGAT
CTTCCAGAGCACAAGAGACCCTCGGCGCCTGTGGACTTCTCAAAGATAGACCCGGGCAAGCCCGAGAGCATCCTGAAGAT
GACCAAGAAGGGGAAGACCCTCATGATGTTCGTCACCGTGTCCGGGAGCCCCACGGAGAAGGAGACCGAGGAGATCACCA
GCCTCTGGCAGGGCAGTCTCTTCAACGCCAACTACGACGTCCAGAGGTTCATCGTGGGCTCAGACCGCGCCATCTTCATG
CTGCGGGACGGCGGTTACGCCTGGGAGATCAAGGACTTCCTCGTCAGCCAAGACAGGTGCGCCGACGTCACGCTGGAGGG
GCAGGTGTACCCTGGCAAAGGAGGAGGGGACAAGGAGAAAAACAGAACAAAGCAGGACAAGGGGAGAAAGAAGAAAGAAG
GAGAACCGAAGGCCCGGGCCTCCAAGGATGACAATCGAGCCCGGAGTAAGAGGGAGGACTTGTGA
ATGGCGGCCTCCAGCTGGGCTCGCAAGGCCGTGGTCCTGCTTTGTGCGTCCGACCTGCTGCTGCTGTTGCTGCTGCTGCC
GCCGCCGAGAGCCTCCGCGGCCGAGGGCCCGGCGGGGACACCTGGCGAGGCTAGTGCCCCTCCTCGGAAGAAGAAGAAAG
ACATCCGCGATTACAATGACGCGGACATGGCGCGGCTCCTGGAGCAGTGGGAGAAAGATGATGACATTGAGGAAGGGGAT
CTTCCAGAGCACAAGAGACCCTCGGCGCCTGTGGACTTCTCAAAGATAGACCCGGGCAAGCCCGAGAGCATCCTGAAGAT
GACCAAGAAGGGGAAGACCCTCATGATGTTCGTCACCGTGTCCGGGAGCCCCACGGAGAAGGAGACCGAGGAGATCACCA
GCCTCTGGCAGGGCAGTCTCTTCAACGCCAACTACGACGTCCAGAGGTTCATCGTGGGCTCAGACCGCGCCATCTTCATG
CTGCGGGACGGCGGTTACGCCTGGGAGATCAAGGACTTCCTCGTCAGCCAAGACAGGTGCGCCGACGTCACGCTGGAGGG
GCAGGTGTACCCTGGCAAAGGAGGAGGGGACAAGGAGAAAAACAGAACAAAGCAGGACAAGGGGAGAAAGAAGAAAGAAG
GAGAACCGAAGGCCCGGGCCTCCAAGGATGACAATCGAGCCCGGAGTAAGAGGGAGGACTTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 18 .04 RPM |
| SRP017611_kidney | 48 .55 RPM |
| SRP017611_brain | 30 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007811 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000117899 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000027583 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000014513 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019402 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000007366 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1947 | 66.20 | 58.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000016290 retrocopies