Parental gene:

MESDC2, ENSCJAG00000007811

Aliases:None
Description:mesoderm development candidate 2 [Source:HGNC Symbol;Acc:13520]
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:25119320..25158906(+)


>ENSCJAG00000007811
ATGGCGGCCTCCACTTGGGCACGCAAGGCCGTGGTTCTGCTTTGTGCCTCTGACCTGCTGCTGTTGCTGCTACCACCGCC
TGGGGCCTGCACGGCCGAAGGCTCGTCCGGGACGCCCGACGAGTCTACCCCACCTCCCCGGAAGAAGAAGAAGGATATTC
GCGATTACAATGATGCAGACATGGCGCGTCTTCTGGAGCAATGGGAGAAAGATGATGACATTGAAGAAGGAGATCTTCCA
GAGCACAAGAGACCCTCAGCACCTGTCGACTTCTCAAAGATAGACCCAAGCAAGCCTGAAAGCATATTGAAAATGACGAA
GAAAGGGAAGACTCTCATGATGTTTGTCACCGTATCAGGAAGCCCCACTGAGAAGGAGACAGAGGAAATCACGAGCCTCT
GGCAGGGCAGCCTTTTCAATGCCAACTATGACGTCCAGAGGTTCATTGTGGGATCAGACCGTGCTATCTTCATGCTTCGC
GATGGGAGCTACGCCTGGGAGATCAAGGACTTTTTGGTCAGTCAAGACAGGTGTGCTGATGTAACTCTGGAGGGCCAGGT
GTACCCTGGCAAAGGAGGAGGAAGCAAAGAGAAAAATAAAACAAAGCAAGACAAGGGCAAAAAGAAGAAGGAAGGAGATC
TGAAATCTCGGGCTTCCAAGGAAGACAGTCGAGCTGGGAATAAAAGAGAAGACCTGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 15 .13 RPM
SRP051959_skeletal_muscle 6 .75 RPM
SRP051959_lymph_node 14 .75 RPM
SRP051959_lung 12 .54 RPM
SRP051959_liver 20 .19 RPM
SRP051959_kidney 23 .14 RPM
SRP051959_heart 9 .65 RPM
SRP051959_colon 9 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000117899 ortholog_one2one 1 retrogene
retro_hsap_990,
Gorilla gorilla ENSGGOG00000027583 ortholog_one2one 1 retrogene
retro_ggor_793,
Loxodonta africana ENSLAFG00000014513 ortholog_one2one 1 retrogene
retro_lafr_505,
Monodelphis domestica ENSMODG00000019402 ortholog_one2many 2 retrogenes
retro_mdom_30, retro_mdom_344,
Oryctolagus cuniculus ENSOCUG00000016290 ortholog_one2one 1 retrogene
retro_ocun_1947,
Pan troglodytes ENSPTRG00000007366 ortholog_one2one 1 retrogene
retro_ptro_759,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3285 56.25 88.79
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000007811 retrocopies