Parental gene:

TPRKB, ENSOCUG00000016251

Aliases:None
Description:TP53RK binding protein [Source:HGNC Symbol;Acc:24259]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:2:112774148..112779777(+)


>ENSOCUG00000016251
ATGCAGCTAATGCACCAGCTGGACCTGTTTCCCGAATGCAGGGTGACCCTTTTGTTGTTTAAAGATGTAAAAAATGCTGG
AGACCTGAGAAAAAAGGCCATGGAAGGCACCATTGATGGTTCACTGATAAATCCTACAGTGATTGTCGATCCATTTCAGA
TACTTGTGGCAGCAAACAAAGCCGTTCACCTCTACAAACTGGGAAAAATGAAGACAAGAACACTGTCTACGGAAATTATT
TTCAACCTCTCCCCAAACAACAATATTTCAGAAGCTTTGAAAAAATTTGGTATCTCAGGAAATGATACTTCAATTCTAAT
TGTTTACGTTGAAGAGAGAGAAAAACAAATAAATCAAGAAGACCTAATATCTCAAGTGGAAGGGCAGCAGGTTTCTCTGG
AAAAGCTTCCTGAAATAACAAATATTACAGAAGTCAAAAAGATATATAAACTGTCCTCACAAGAAGAAAGTATTGGGACA
TTATTAGATGGTATCATTTGTAGAATGTCAACAAAAGATGTTTTGTGA

Library Parental gene expression (RPM)
SRP017611_liver 4 .47 RPM
SRP017611_kidney 8 .51 RPM
SRP017611_brain 7 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012021 ortholog_one2many 1 retrogene
retro_chof_35,
Callithrix jacchus ENSCJAG00000004162 ortholog_one2many 3 retrogenes
retro_cjac_1999, retro_cjac_2867, retro_cjac_3065,
Homo sapiens ENSG00000144034 ortholog_one2one 1 retrogene
retro_hsap_552,
Gorilla gorilla ENSGGOG00000009062 ortholog_one2one 1 retrogene
retro_ggor_501,
Macaca mulatta ENSMMUG00000030805 ortholog_one2many 1 retrogene
retro_mmul_1571,
Monodelphis domestica ENSMODG00000016950 ortholog_one2one 2 retrogenes
retro_mdom_1264, retro_mdom_465,
Nomascus leucogenys ENSNLEG00000000300 ortholog_one2one 2 retrogenes
retro_nleu_2021, retro_nleu_957,
Otolemur garnettii ENSOGAG00000032893 ortholog_one2one 2 retrogenes
retro_ogar_523, retro_ogar_849,
Pongo abelii ENSPPYG00000012292 ortholog_one2one 1 retrogene
retro_pabe_509,
Pteropus vampyrus ENSPVAG00000012419 ortholog_one2one 1 retrogene
retro_pvam_75,
Ictidomys tridecemlineatus ENSSTOG00000016406 ortholog_one2one 4 retrogenes
retro_itri_1613, retro_itri_453, retro_itri_918, retro_itri_919,
Tupaia belangeri ENSTBEG00000014584 ortholog_one2many 2 retrogenes
retro_tbel_33, retro_tbel_3630,
Vicugna pacos ENSVPAG00000007934 ortholog_one2one 2 retrogenes
retro_vpac_149, retro_vpac_192,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_519 75.19 72.57
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ocun_769 79.66 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOCUG00000016251 retrocopies