Parental gene:

ENSOCUG00000014956

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:14:15136770..15157929(-)


>ENSOCUG00000014956
ATGGATGCACTCGTAGAAGATGATATTTGCATTCTGAATCATGAGAAAGCCCATAGGAGAGATCCAGTGACTCCAGTCTC
AATATATGCAGGAGATGAATCTGTTGCTTCACATTTTGCCCTTGTCACTGCATATGAAGATATCAAAAAACGACTTAAAG
ATTCAGAAAAGGAGAACTCTCTCTTGAAGAAAAGAATAAGGTTTTTGGAAGAAAAGCTAATAGGGGCTCGATTCGATGAA
GAAACAAGTTCTGTGGGACGAGAACAAGTAAATAAGGCCTATCATGCATATCGAGAGGTTTGCATTGATAGAGATAATTT
GAAGAACAAATTGGATAAAATGAATAAAGACAACTCTGAATCTCTGAAAGTGTTGAACGAACAACTACAATCAAAAGAAG
TAGAACTCCTCCAGCTAAGAACAGAAGTGGAAACTCAGCAGGTGATGAGGAATTTAAATTCTCCTTCATCAAACTGGGAG
GTGGAAAAATTGAACTGTGACCTGAAGATCCATGGTTTGGAAAAGGAGCTGGAATTGATGAGGAAAGAATGTAGCAATCT
CAAAATAGAACTACAAAAGGCCAAGCAAACGGATCCATCTGAGGATGACAACCTGAAGAACTGCACTCTCCAAAGAGTAA
GCATTTCAAGTGATAATATGCAGCATGCATACTGGGAACTGAAGAGAGAGATGTCTAATCTACATCTGGTGACTCAAGTA
CAAGCTGAACTACTAAGAAAACTGAAAACTCCAACTACAATCAAGAAAGCCTATACCCCAGCAGCCTGCACTGAAGACCT
TGGGAAAGATAGCACAAAACTCCACTTGACAAATTTTACTGCATCCTACAAAAGACATGCCCCCCTCTCACCAAATGGCA
AAGCTGTCTGTCATACTACATCTTCCCCTTTTCCAGGAGATACAAAGATTTTATCAGAGAAAGAAGTTCTCCAATCATGG
ACAGATAATGAGAGATCTATTCCTAATGATGGTACAAACTTTCAGGAACACAACTCCTACAGCAGAAATTCTCTAGAAGA
TAATTCTTGGGTATTTCCAAGCCCTCCTAAATCAAGTGAGACAGCATTTGGGGAAACTAAAAGTAAAACTTCGCCTTTAC
CCAATCTGCCATCACTGCATTACTTGGATCAACATAACCAAAACTGCCTTTATAAATAA

Library Parental gene expression (RPM)
SRP017611_liver 9 .48 RPM
SRP017611_kidney 22 .81 RPM
SRP017611_brain 30 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010432 ortholog_one2many 2 retrogenes
retro_chof_1794, retro_chof_234,
Dasypus novemcinctus ENSDNOG00000011053 ortholog_one2many 2 retrogenes
retro_dnov_1377, retro_dnov_542,
Homo sapiens ENSG00000163512 ortholog_one2many 2 retrogenes
retro_hsap_1491, retro_hsap_1564,
Gorilla gorilla ENSGGOG00000022881 ortholog_one2many 2 retrogenes
retro_ggor_1145, retro_ggor_1189,
Loxodonta africana ENSLAFG00000008538 ortholog_one2many 2 retrogenes
retro_lafr_529, retro_lafr_925,
Myotis lucifugus ENSMLUG00000000043 ortholog_many2many 3 retrogenes
retro_mluc_1707, retro_mluc_435, retro_mluc_611,
Macaca mulatta ENSMMUG00000000056 ortholog_one2many 1 retrogene
retro_mmul_2135,
Monodelphis domestica ENSMODG00000015075 ortholog_one2many 1 retrogene
retro_mdom_1786,
Nomascus leucogenys ENSNLEG00000004069 ortholog_one2many 1 retrogene
retro_nleu_1714,
Otolemur garnettii ENSOGAG00000005896 ortholog_many2many 1 retrogene
retro_ogar_3078,
Pongo abelii ENSPPYG00000014053 ortholog_one2many 2 retrogenes
retro_pabe_1241, retro_pabe_3784,
Pan troglodytes ENSPTRG00000014707 ortholog_one2many 1 retrogene
retro_ptro_1052,
Tursiops truncatus ENSTTRG00000016434 ortholog_one2many 1 retrogene
retro_ttru_1093,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1778 75.47 81.12
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Download FASTA sequences of all ENSOCUG00000014956 retrocopies