Parental gene:

MMU.17969, ENSMMUG00000000056

Aliases:None
Description:5-azacytidine-induced protein 2 [Source:RefSeq peptide;Acc:NP_001253904]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:170756239..170772390(-)


>ENSMMUG00000000056
ATGGATGCACTGGTAGAAGATGATATCTGTATTCTGAATCATGAAAAAGCCCATAAGAGAGATACAGTGACTCCAGTTTC
AATATATTCAGGAGATGAATCTGTTGCTTCCCATTTTGCTCTTGTCACTGCATATGAAGACATCAAAAAACGACTTAAGG
ATTCAGAGAAAGAGAACTCTTTGTTAAAGAAGAGAATAAGATTTTTGGAAGAAAAGCTAATAGCTCGATTTGATGAAGAA
ACAAGTTCCGTGGGACGAGAACAAGTAAATAAGGCCTATCATGCATATCGAGAGGTTTGCATTGATAGAGATAATTTGAA
GAGCAAACTGGACAAAATGAATAAAGACAACTCTGAATCTTTGAAAGTATTGAATGAGCAGCTACAATCTAAAGAAGTAG
AACTCCTCCAGCTGAGGACAGAGGTGGAAACTCAGCAGGTGATGAGGAATTTAAATACACCTTCATCAAACTGGGAGGTG
GAAAAGTTGAGCTGTGACCTGAAGATCCATGGCTTGGAACAAGAGCTGGAACTAATGAGAAAAGAATGTAGCGATCTCAA
AATAGAACTACAGAAAGCCAAACAGACGGATCCATATCAGGAAGACAATCTGAAGAGCAGAGATCTCCAAAAACTAAGCA
TTTCAAGTGATAATATGCAGCATGCATACTGGGAACTGAAGAGAGAAATGTCTAATTTACATCTGGTGACTCAAGTACAA
GCTGAACTACTAAGAAAACTGAAAACCTCAACTGCAATCAAGAAAGGCAAGTCCTGTGCCCCTGTAGGATGCAGTGAAGA
CCTTGGAAGAGACAGCACAAAACTGCACTTGATGAATTTTACTGCAACATACACAAGACATCCTCCTCTCTCACCAAATG
GCAAAGCTCTTTGTCATGCCGCATCTTCCCCCTTACCAGGAGATATAAAGGTTTTATCAGAGAAAGCAGTCCTCCAGTCA
TGGACAGACAATGAGAGATCCATTCCTAATGATGGTACATGCTTTCAGGAACACAGTTCTTATGGCAGAAATTCTCTTTC
TCTGGAAGACAATTCCTGGGTATTTCCAAGTCCTCCTAAATCAAGTGAGACGGCATTTGGGGAAACTAAAAGTAAAACTT
TACCTTTACCCAACCTTCCACCACTGCATTACTTGGATCAGCATAATCAGAACTGCCTTTATAAGAATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .15 RPM
SRP007412_brain 21 .07 RPM
SRP007412_cerebellum 23 .51 RPM
SRP007412_heart 8 .36 RPM
SRP007412_kidney 19 .48 RPM
SRP007412_liver 5 .98 RPM
SRP007412_testis 21 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010432 ortholog_one2one 2 retrogenes
retro_chof_1794, retro_chof_234,
Dasypus novemcinctus ENSDNOG00000011053 ortholog_one2one 2 retrogenes
retro_dnov_1377, retro_dnov_542,
Homo sapiens ENSG00000163512 ortholog_one2one 2 retrogenes
retro_hsap_1491, retro_hsap_1564,
Gorilla gorilla ENSGGOG00000022881 ortholog_one2one 2 retrogenes
retro_ggor_1145, retro_ggor_1189,
Loxodonta africana ENSLAFG00000008538 ortholog_one2one 2 retrogenes
retro_lafr_529, retro_lafr_925,
Myotis lucifugus ENSMLUG00000000043 ortholog_one2many 3 retrogenes
retro_mluc_1707, retro_mluc_435, retro_mluc_611,
Monodelphis domestica ENSMODG00000015075 ortholog_one2one 1 retrogene
retro_mdom_1786,
Nomascus leucogenys ENSNLEG00000004069 ortholog_one2one 1 retrogene
retro_nleu_1714,
Oryctolagus cuniculus ENSOCUG00000014956 ortholog_one2many 1 retrogene
retro_ocun_1778,
Otolemur garnettii ENSOGAG00000005896 ortholog_one2many 1 retrogene
retro_ogar_3078,
Pongo abelii ENSPPYG00000014053 ortholog_one2one 2 retrogenes
retro_pabe_1241, retro_pabe_3784,
Pan troglodytes ENSPTRG00000014707 ortholog_one2one 1 retrogene
retro_ptro_1052,
Tursiops truncatus ENSTTRG00000016434 ortholog_one2one 1 retrogene
retro_ttru_1093,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2135 69.64 76.14
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000000056 retrocopies