Parental gene: | UHMK1, ENSOCUG00000012411 |
| Aliases: | None |
| Description: | U2AF homology motif (UHM) kinase 1 [Source:HGNC Symbol;Acc:19683] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 13:30514775..30534584(-) |
>ENSOCUG00000012411
ATGGCAGGGTCCGGCTGTGCGTGGGGCGCGGAGCCGCCGCGGTTTCTGGAGGCCTTCGGGCGGCTGTGGCAGGTCCAGAG
CCGTCTGGGTAGCGGCTCCTCGGCCTCGGTGTACCGGGTGCGCTGCTGCGGCACCCCAGGCTCGCCGCCCGGAGCCCTCA
AGCAGTTCTTGCCGCCAGGAACCACCGGGGCTGCGGCCTCGGCCGCCGAGTATGGGTTCCGCAAAGAGAGAGCAGCGCTG
GAGCAGTTGCAGGGTCACAGGAACATCGTGACTTTATATGGAGTCTTTACAATCCACTTCTCTCCAAATGTGCCATCACG
CTGTCTGTTGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGCTTTTATATTCCAGTCACCAGGGTTGTTCCATGTGGA
TGATACAGCATTGTGCCAGAGATGTTCTGGAAGCCCTTGCTTTCCTTCATCATGAGGGTTACGTCCACGCAGACCTCAAA
CCGCGGAACATACTGTGGAGTGCAGAGAACGAATGTTTTAAACTCATTGACTTTGGACTCAGCTTCAAAGAAGGCAATCA
GGATGTAAAGTACATTCAGACAGACGGGTATCGTGCTCCAGAAGCAGAACTGCAAAATTGTTTGGCCCAGGCTGGCCTGC
AGAGTGATACAGAATGTACCTCAGCTGTTGACCTGTGGAGCCTAGGAATCATTTTACTGGAAATGTTCTCAGGAATGAAA
CTGAAACACACAGTCCGATCTCAGGAATGGAAGGCAAATAGTTCTGCTATTATTGATCACATATTTGCCAGTAAAGCAGT
GGTGAATGCCGCAATTCCAGCCTATCACCTAAGAGACCTTATCAAAAGCATGCTTCATGATGATCCAAGCAGAAGAATTC
CTGCTGAAATGGCATTGTGCAGTCCATTCTTTAGCATTCCTTTTGCCCCTCATATTGAAGACCTGGTGATGCTTCCTACT
CCAGTGCTAAGACTGCTGAATGTGCTAGATGATGATTATCTTGAGAATGAAGAGGAATATGAAGATATTGTAGAAGATGT
AAAAGAGGAATGTCAGAAATATGGACCAGTGGTATCTCTGCTTGTTCCAAAGGAAAATCCTGGCAGAGGGCAAGTCTTTG
TCGAGTATGCCAATGCTGGTGATTCCAAAGCTGCTCAGAAATTACTGACTGGAAGGATGTTTGATGGGAAGTTTGTTGTG
GCTACATTCTACCCACTGAGTGCCTACAAGAGGGGATATCTGTATCAAACCTTGCTTTAA
ATGGCAGGGTCCGGCTGTGCGTGGGGCGCGGAGCCGCCGCGGTTTCTGGAGGCCTTCGGGCGGCTGTGGCAGGTCCAGAG
CCGTCTGGGTAGCGGCTCCTCGGCCTCGGTGTACCGGGTGCGCTGCTGCGGCACCCCAGGCTCGCCGCCCGGAGCCCTCA
AGCAGTTCTTGCCGCCAGGAACCACCGGGGCTGCGGCCTCGGCCGCCGAGTATGGGTTCCGCAAAGAGAGAGCAGCGCTG
GAGCAGTTGCAGGGTCACAGGAACATCGTGACTTTATATGGAGTCTTTACAATCCACTTCTCTCCAAATGTGCCATCACG
CTGTCTGTTGCTTGAACTCCTGGATGTCAGTGTTTCGGAATTGCTTTTATATTCCAGTCACCAGGGTTGTTCCATGTGGA
TGATACAGCATTGTGCCAGAGATGTTCTGGAAGCCCTTGCTTTCCTTCATCATGAGGGTTACGTCCACGCAGACCTCAAA
CCGCGGAACATACTGTGGAGTGCAGAGAACGAATGTTTTAAACTCATTGACTTTGGACTCAGCTTCAAAGAAGGCAATCA
GGATGTAAAGTACATTCAGACAGACGGGTATCGTGCTCCAGAAGCAGAACTGCAAAATTGTTTGGCCCAGGCTGGCCTGC
AGAGTGATACAGAATGTACCTCAGCTGTTGACCTGTGGAGCCTAGGAATCATTTTACTGGAAATGTTCTCAGGAATGAAA
CTGAAACACACAGTCCGATCTCAGGAATGGAAGGCAAATAGTTCTGCTATTATTGATCACATATTTGCCAGTAAAGCAGT
GGTGAATGCCGCAATTCCAGCCTATCACCTAAGAGACCTTATCAAAAGCATGCTTCATGATGATCCAAGCAGAAGAATTC
CTGCTGAAATGGCATTGTGCAGTCCATTCTTTAGCATTCCTTTTGCCCCTCATATTGAAGACCTGGTGATGCTTCCTACT
CCAGTGCTAAGACTGCTGAATGTGCTAGATGATGATTATCTTGAGAATGAAGAGGAATATGAAGATATTGTAGAAGATGT
AAAAGAGGAATGTCAGAAATATGGACCAGTGGTATCTCTGCTTGTTCCAAAGGAAAATCCTGGCAGAGGGCAAGTCTTTG
TCGAGTATGCCAATGCTGGTGATTCCAAAGCTGCTCAGAAATTACTGACTGGAAGGATGTTTGATGGGAAGTTTGTTGTG
GCTACATTCTACCCACTGAGTGCCTACAAGAGGGGATATCTGTATCAAACCTTGCTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .77 RPM |
| SRP017611_kidney | 5 .37 RPM |
| SRP017611_brain | 6 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000001048 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002941 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1245 | 83.46 | 60.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1535 | 83.33 | 67.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_1547 | 82.98 | 67.06 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000012411 retrocopies