Parental gene:

NPM1, ENSOCUG00000011117

Aliases:None
Description:nucleophosmin [Source:RefSeq peptide;Acc:NP_001164790]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:3:52619601..52633186(+)


>ENSOCUG00000011117
ATGGAAGATTCGATGGACATGGACATGAGCCCCCTGAGGCCCCAGAACTATCTTTTCGGTTGTGAACTAAAGGCTGACAA
AGATTATCACTTTAAAGTGGACAATGATGAAAATGAGCACCAGTTATCTTTAAGAACGGTCAGTTTAGGCGCTGGTGCCA
AGGATGAACTGCACATTGTTGAAGCAGAGGCAATGAATTATGAAGGCAGCCCGATTAAAGTCACACTGGCAACGCTGAAA
ATGTCTGTACAGCCAACGGTTTCCCTTGGGGGCTTTGAAATAACACCACCTGTGGTCTTTATAGTGAGTTCCAGTGAGAA
CCCAATGATAATGTCTGATAATTTTATTTTAGCTGTGGAGGAAGATGCAGAATCAGAAGACGAGGAGGAAGAGGATGTGA
AGCTATTAAGTATATCTGGAAAACGATCTGCCCCTGGAGGTGGCAGCAAGGTGCCACAGAAAAAAGTAAAGCTTGCTGCT
GAAGAGGAGAAAGATGGAAAGGGTATGGCACAGGACAGATTTGATGATGATGATGATTTTGATGATGAGGAAACTGAAGA
AAAAGCTCCAGTGAAGAAATCTATACGAGATACCCCAGCCAAAAATGCACAGAAATCAAACCAGAATGGGAAAGACTCAA
AACCATCAACACCAAGATCAAAAGGTCAAGAATCCTTCAAAAAACAGGAAAAAACTCCTAAAACACCAAAAGGACCTACT
TCCGTAGAAGACATTAAAGCAAAAATGCAAGCAAGTATAGAAAAAGGTGGTTCTCTTCCCAAAGTGGAAGCCAAATTCAT
CAATTATGTGAAGAATTGCTTCCGGATGACTGACCAGGAGGCTATTCAAGATCTTTGGCAGTGGAGGAAGTCTCTTTAA

Library Parental gene expression (RPM)
SRP017611_liver 16 .03 RPM
SRP017611_kidney 47 .13 RPM
SRP017611_brain 31 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019334 possible_ortholog 13 retrogenes
retro_cjac_1559, retro_cjac_1682, retro_cjac_1696, retro_cjac_1733, retro_cjac_2075, retro_cjac_2351, retro_cjac_2368, retro_cjac_2533, retro_cjac_2605, retro_cjac_3270, retro_cjac_3416, retro_cjac_4117, retro_cjac_838,
Mus musculus ENSMUSG00000057113 possible_ortholog 5 retrogenes
retro_mmus_1301, retro_mmus_1798, retro_mmus_3131, retro_mmus_539, retro_mmus_550,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_412 51.69 98.63
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Download FASTA sequences of all ENSOCUG00000011117 retrocopies