Parental gene: | SERBP1, ENSOCUG00000008946 |
| Aliases: | None |
| Description: | SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:17860] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 13:98827474..98845640(+) |
>ENSOCUG00000008946
ATGCCTGGGCACCTACAGGAAGGCTTCGGCTGCGTGGTCACCAACCGATTCGACCAGTTATTTGACGACGAATCGGACCC
CTTCGAGGTGCTGAAGGCAGCAGAGAACAAGAAAAAAGAAGCCGGCGGGGGCGGCGTTGGGGGCCCCGGGGCCAAGAGCG
CAGCTCAGGCCGCGGCCCAGACCAACTCCAACGCGGCAGGCAAACAGCTGCGTAAAGAGTCCCAGAAAGACCGCAAAAAC
CCGCTGCCTCCCAACGTTGGCGTGGTTGACAAGAAAGAGGAGACGCAGCCGCCCGTGGCGCTCAAGAAAGAAGGAATAAG
ACGTGTTGGGAGAAGACCTGATCAACAGCTTCAAGGTGAAGGGAAAATAATTGATAGAAGACCAGAAAGGCGACCACCTC
GTGAAAGAAGATTTGAAAAGCCACTAGAAGAAAAGGGTGAAGGAGGAGAGTTTTCAGTTGATAGGCCTATAATTGACCGA
CCTATCCGAGGCCGTGGTGGTCTAGGAAGAGGTCGAGGAGGCCGTGGACGTGGAATGGGCCGAGGAGATGGATTTGATTC
TCGTGGCAAACGTGAATTTGACAGGCATAGTGGAAGTGATAGATCTTCTTTTTCACATTACAGTGGTCTGAAGCACGAGG
ACAAACGTGGAGGTAGCGGATCTCACAACTGGGGAACTGTCAAAGATGAATTAACAGAGTCCCCAAAATACATTCAGAAA
CAAATATCTTATAATTGCAGTGACTTGGATCAATCAAATGTGACTGAGGAAACACCTGAAGGTGAAGAACATCCAGTGGC
AGACACTGAAAATAAGGAAAACGAAGTGGAAGAGGTAAAGGAAGAGGGTCCAAAAGAGATGACTTTGGATGAGTGGAAAG
CAATTCAGAATAAAGACCGGGCAAAAGTAGAATTTAATATCCGAAAACCAAATGAAGGTGCTGATGGGCAATGGAAGAAA
GGATTTGTTCTTCATAAATCAAAGAGTGAAGAGGCTCATGCTGAAGACTCTGTTATGGACCATCATTTCCGGAAGCCAGC
AAATGATATAACGTCTCAGCTGGAGATCAATTTTGGAGACCTAGGCCGCCCAGGACGTGGTGGCAGGGGAGGGCGAGGTG
GACGTGGGCGTGGTGGACGTCCGAACCGTGGCAGCAGGACTGACAAGTCAAGTGCTTCTGCTCCTGATGTGGATGACCCA
GAGGCATTTCCAGCTCTGGCT
ATGCCTGGGCACCTACAGGAAGGCTTCGGCTGCGTGGTCACCAACCGATTCGACCAGTTATTTGACGACGAATCGGACCC
CTTCGAGGTGCTGAAGGCAGCAGAGAACAAGAAAAAAGAAGCCGGCGGGGGCGGCGTTGGGGGCCCCGGGGCCAAGAGCG
CAGCTCAGGCCGCGGCCCAGACCAACTCCAACGCGGCAGGCAAACAGCTGCGTAAAGAGTCCCAGAAAGACCGCAAAAAC
CCGCTGCCTCCCAACGTTGGCGTGGTTGACAAGAAAGAGGAGACGCAGCCGCCCGTGGCGCTCAAGAAAGAAGGAATAAG
ACGTGTTGGGAGAAGACCTGATCAACAGCTTCAAGGTGAAGGGAAAATAATTGATAGAAGACCAGAAAGGCGACCACCTC
GTGAAAGAAGATTTGAAAAGCCACTAGAAGAAAAGGGTGAAGGAGGAGAGTTTTCAGTTGATAGGCCTATAATTGACCGA
CCTATCCGAGGCCGTGGTGGTCTAGGAAGAGGTCGAGGAGGCCGTGGACGTGGAATGGGCCGAGGAGATGGATTTGATTC
TCGTGGCAAACGTGAATTTGACAGGCATAGTGGAAGTGATAGATCTTCTTTTTCACATTACAGTGGTCTGAAGCACGAGG
ACAAACGTGGAGGTAGCGGATCTCACAACTGGGGAACTGTCAAAGATGAATTAACAGAGTCCCCAAAATACATTCAGAAA
CAAATATCTTATAATTGCAGTGACTTGGATCAATCAAATGTGACTGAGGAAACACCTGAAGGTGAAGAACATCCAGTGGC
AGACACTGAAAATAAGGAAAACGAAGTGGAAGAGGTAAAGGAAGAGGGTCCAAAAGAGATGACTTTGGATGAGTGGAAAG
CAATTCAGAATAAAGACCGGGCAAAAGTAGAATTTAATATCCGAAAACCAAATGAAGGTGCTGATGGGCAATGGAAGAAA
GGATTTGTTCTTCATAAATCAAAGAGTGAAGAGGCTCATGCTGAAGACTCTGTTATGGACCATCATTTCCGGAAGCCAGC
AAATGATATAACGTCTCAGCTGGAGATCAATTTTGGAGACCTAGGCCGCCCAGGACGTGGTGGCAGGGGAGGGCGAGGTG
GACGTGGGCGTGGTGGACGTCCGAACCGTGGCAGCAGGACTGACAAGTCAAGTGCTTCTGCTCCTGATGTGGATGACCCA
GAGGCATTTCCAGCTCTGGCT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 28 .59 RPM |
| SRP017611_kidney | 49 .66 RPM |
| SRP017611_brain | 46 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017440 | possible_ortholog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010396 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001424 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001256 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000000803 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000003689 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1041 | 97.42 | 57.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000008946 retrocopies