Parental gene:

ENSOCUG00000008666

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:X:36864831..36990798(+)


>ENSOCUG00000008666
ATGGAAGAATCTGATTCTGAGAAAAAGATGGAGAAAGAAAATTTGGGGCCGAGAATGGATCCTCCACTAGGGGAACAAGA
AGGATCGCTAGGGTGGGTGCTACCAAACACAGCCATGAAGAAAAAGGTGCTGTTGATGGGTAAAAGTGGGTCTGGTAAGA
CCAGCATGAGGTCTATTATCTTTGCAAATTATATTGCCAGAGACACACGTCGCCTTGGTGCAACAATACTAGACCGTATA
CATAGTCTTCAAATTAATAGCAGTTTGAGCACCTACTCTCTCGTAGACTCTGTTGGAAATACAAAGACATTTGATGTAGA
ACATTCTCATGTTCGATTTCTGGGAAACCTGGTTTTGAACCTGTGGGATTGTGGTGGACAAGACACCTTCATGGAAAATT
ATTTTACTAGCCAAAGGGACAACATCTTCCGAAATGTGGAGGTTCTGATTTATGTCTTTGATGTGGAGAGCCGTGAACTG
GAAAAGGACATGCACTATTACCAATCATGCCTGGAAGCTATTCTGCAGAACTCTCCAGATGCCAAAATCTTTTGCTTGGT
ACACAAAATGGATCTGGTACAAGAGGATCAACGGGACCTGATTTTTAAAGAGCGAGAAGAAGATCTAAGGCGTTTGTCTC
GCCCATTGGAATGCTCTTGCTTCCGAACATCTATCTGGGATGAAACTCTCTATAAGGCTTGGTCGAGCATTGTTTATCAA
CTGATTCCCAATGTTCAGCAGCTGGAAATGAATCTAAGGAATTTTGCTGAAATTATCGAAGCAGATGAAGTACTTCTGTT
TGAGAGAGCTACTTTTCTGGTGATTTCTCATTATCAGTGTAAAGAGCAGCGTGATGCCCATAGATTTGAAAAAATCAGCA
ATATTATTAAGCAATTCAAGCTGAGCTGCAGCAAGCTGGCTGCCTCTTTCCAGAGTATGGAAGTTAGAAATTCTAATTTT
GCTGCTTTCATTGATATCTTTACATCCAACACTTATGTGATGGTTGTGATGTCAGATCCATCCATTCGTTTGCAGTCCGA
GGGAGTGAGGACCCCGAGTTCACCAGCTCAATCCGGCCCCGCCCCGTCGGCCAGGGGGCTGCGAGGAGAGGATGCCTACG
GAAGCGCAGAGTCCAAAAGTAAGTTGTTTCATTTTGCTTAA

Library Parental gene expression (RPM)
SRP017611_liver 1 .23 RPM
SRP017611_kidney 2 .33 RPM
SRP017611_brain 5 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012920 possible_ortholog 1 retrogene
retro_amel_1842,
Canis familiaris ENSCAFG00000016503 possible_ortholog 1 retrogene
retro_cfam_421,
Callithrix jacchus ENSCJAG00000007317 possible_ortholog 1 retrogene
retro_cjac_117,
Cavia porcellus ENSCPOG00000011266 possible_ortholog 1 retrogene
retro_cpor_86,
Equus caballus ENSECAG00000006020 possible_ortholog 1 retrogene
retro_ecab_608,
Felis catus ENSFCAG00000013932 possible_ortholog 1 retrogene
retro_fcat_21,
Homo sapiens ENSG00000083750 possible_ortholog 1 retrogene
retro_hsap_4,
Gorilla gorilla ENSGGOG00000011501 possible_ortholog 1 retrogene
retro_ggor_65,
Loxodonta africana ENSLAFG00000016144 possible_ortholog 1 retrogene
retro_lafr_102,
Myotis lucifugus ENSMLUG00000015720 possible_ortholog 1 retrogene
retro_mluc_40,
Macaca mulatta ENSMMUG00000017635 possible_ortholog 1 retrogene
retro_mmul_249,
Mustela putorius furo ENSMPUG00000003730 possible_ortholog 1 retrogene
retro_mputfur_87,
Mus musculus ENSMUSG00000041658 possible_ortholog 1 retrogene
retro_mmus_159,
Nomascus leucogenys ENSNLEG00000016350 possible_ortholog 1 retrogene
retro_nleu_13,
Otolemur garnettii ENSOGAG00000000345 possible_ortholog 1 retrogene
retro_ogar_675,
Procavia capensis ENSPCAG00000003417 possible_ortholog 1 retrogene
retro_pcap_6,
Pongo abelii ENSPPYG00000020398 possible_ortholog 1 retrogene
retro_pabe_191,
Pan troglodytes ENSPTRG00000021955 possible_ortholog 1 retrogene
retro_ptro_48,
Rattus norvegicus ENSRNOG00000003160 possible_ortholog 1 retrogene
retro_rnor_2,
Sus scrofa ENSSSCG00000029800 possible_ortholog 1 retrogene
retro_sscr_15,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_166 97.79 72.73
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Download FASTA sequences of all ENSOCUG00000008666 retrocopies