Parental gene: | UBFD1, ENSOCUG00000008444 |
| Aliases: | None |
| Description: | ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:30565] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 6:14306936..14319468(+) |
>ENSOCUG00000008444
GCAGGGGCCGGGCCGGGGAAGCGGAGGAGGCGGGTCTCCATAGAAACCTCCACCTGTTTCCGGCCAGGCTGTGCGCGATT
AGGGGCTGCTGCGGGGGCCAATCTCAGCCAGCTCGTCTCTTCCCAGCGGCCTCTGCGGGAGCGGTGGGTGTTGTACACAA
TCATCATGGCGGCGGCCGGGGCCCCGGATGGCATGGAGGAACCTGGCATGGACACGGAGGCCGAGACCGTGGCCAGCGAG
GCGCCCGCGCGGCCCCTCAACTGCGTGGAGACCGAAGCCGCAGCGGGGGCGGCGGCCGAGGACTCCTGCGCGGCGCGAGG
CAGCCTGCAGGCCTCGGTCAGCAACGGCGAGGACGCGGGCGGCGGCGCGGGCCAGGAGCTGGTGGACCTGAAGATCATCT
GGAACAAGACCAAGCACGACGTGAAGTTCCCGCTGGACAGCACGGGCTCCGAGCTGAAACAGAAGATCCACTCGATCACA
GGTCTCCCACCCGCCATGCAGAAAGTCATGTATAAGGGACTCGTCCCTGAGGATAAGACGTTGAGAGAAATCAAAGTGAC
CAGTGGAGCCAAGATCATGGTGGTCGGCTCCACAATCAATGATGTGTTAGCTGTGAACACGCCCAAAGACGCAGCGCAGC
AAGATGCCAAGGCCGAAGAGAACAAGAAAGAGCCCCTGTGCAGGCAGAAGCAACACAGGAAAGTCCTGGATAAAGGAAAA
CCCGAGGACGTGATGCCATCAGTGAAGGGTGCCCAGGAGCGCCTGCCGACGGTCCCCTTGTCCGGCATGTACAATAAGTC
CGGGGGAAAAGTGAGACTCACCTTTAAGCTGGAGCAAGACCAGCTGTGGATCGGCACGAAAGAGCGGACTGAGAAATTGC
CCATGGGCTCCATTAAAAATGTGGTCAGTGAACCTATCGAAGGACACGAAGACTACCACATGATGGCGTTTCAGTTGGGC
CCCACAGAAGCCTCTTACTACTGGGTGTACTGGGTTCCAACTCAATATGTGGATGCAATCAAAGACACTGTGCTGGGCAA
ATGGCAGTATTTTTGA
GCAGGGGCCGGGCCGGGGAAGCGGAGGAGGCGGGTCTCCATAGAAACCTCCACCTGTTTCCGGCCAGGCTGTGCGCGATT
AGGGGCTGCTGCGGGGGCCAATCTCAGCCAGCTCGTCTCTTCCCAGCGGCCTCTGCGGGAGCGGTGGGTGTTGTACACAA
TCATCATGGCGGCGGCCGGGGCCCCGGATGGCATGGAGGAACCTGGCATGGACACGGAGGCCGAGACCGTGGCCAGCGAG
GCGCCCGCGCGGCCCCTCAACTGCGTGGAGACCGAAGCCGCAGCGGGGGCGGCGGCCGAGGACTCCTGCGCGGCGCGAGG
CAGCCTGCAGGCCTCGGTCAGCAACGGCGAGGACGCGGGCGGCGGCGCGGGCCAGGAGCTGGTGGACCTGAAGATCATCT
GGAACAAGACCAAGCACGACGTGAAGTTCCCGCTGGACAGCACGGGCTCCGAGCTGAAACAGAAGATCCACTCGATCACA
GGTCTCCCACCCGCCATGCAGAAAGTCATGTATAAGGGACTCGTCCCTGAGGATAAGACGTTGAGAGAAATCAAAGTGAC
CAGTGGAGCCAAGATCATGGTGGTCGGCTCCACAATCAATGATGTGTTAGCTGTGAACACGCCCAAAGACGCAGCGCAGC
AAGATGCCAAGGCCGAAGAGAACAAGAAAGAGCCCCTGTGCAGGCAGAAGCAACACAGGAAAGTCCTGGATAAAGGAAAA
CCCGAGGACGTGATGCCATCAGTGAAGGGTGCCCAGGAGCGCCTGCCGACGGTCCCCTTGTCCGGCATGTACAATAAGTC
CGGGGGAAAAGTGAGACTCACCTTTAAGCTGGAGCAAGACCAGCTGTGGATCGGCACGAAAGAGCGGACTGAGAAATTGC
CCATGGGCTCCATTAAAAATGTGGTCAGTGAACCTATCGAAGGACACGAAGACTACCACATGATGGCGTTTCAGTTGGGC
CCCACAGAAGCCTCTTACTACTGGGTGTACTGGGTTCCAACTCAATATGTGGATGCAATCAAAGACACTGTGCTGGGCAA
ATGGCAGTATTTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 24 .66 RPM |
| SRP017611_kidney | 44 .19 RPM |
| SRP017611_brain | 50 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000029331 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020614 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000006727 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_666 | 67.65 | 64.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000008444 retrocopies