Parental gene: | EMC4, ENSOCUG00000006160 |
| Aliases: | None |
| Description: | ER membrane protein complex subunit 4 [Source:HGNC Symbol;Acc:28032] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 17:39443235..39451622(+) |
>ENSOCUG00000006160
ATGACAGCCCAAGGGAGCCTGGTCGCGAACCGAGGCCGGCGCTTCAAGTGGGCCATTGAGCTGAGCGGGCCTGGAGGAGG
CAGCAGGGGCCGAAGTGACCGGAGTAGTGGTCAGGGAGACTCACTGTACCCAGTCGGTTACTTGGACAAGCAAGTGCCTG
ATACCAGTGTGCAGGAGACAGACCGGATCCTGGTGGAGAAGCGTTGCTGGGATATTGCCTTGGGTCCCCTGAAACAGATT
CCTATGAACCTCTTCATCATGTACATGGCAGGCAATACGATCTCCATCTTCCCCACGATGATGGTGTGTATGATGGCCTG
GCGACCCATTCAGGCACTTATGGCTATTTCAGCCACTTTCAAGATGCTAGAAAGTTCAAGCCAGAAATTTCTTCAGGGTT
TGGTCTATCTGATTGGGAACCTGATGGGTTTGGCATTGGCTGTTTACAAGTGCCAGTCTATGGGATTACTGCCTACACAT
GCATCAGATTGGTTAGCCTTCATTGAGCCCCCTGAGAGAATGGAGTTCAGTGGTGGAGGATTACTTCTGTGA
ATGACAGCCCAAGGGAGCCTGGTCGCGAACCGAGGCCGGCGCTTCAAGTGGGCCATTGAGCTGAGCGGGCCTGGAGGAGG
CAGCAGGGGCCGAAGTGACCGGAGTAGTGGTCAGGGAGACTCACTGTACCCAGTCGGTTACTTGGACAAGCAAGTGCCTG
ATACCAGTGTGCAGGAGACAGACCGGATCCTGGTGGAGAAGCGTTGCTGGGATATTGCCTTGGGTCCCCTGAAACAGATT
CCTATGAACCTCTTCATCATGTACATGGCAGGCAATACGATCTCCATCTTCCCCACGATGATGGTGTGTATGATGGCCTG
GCGACCCATTCAGGCACTTATGGCTATTTCAGCCACTTTCAAGATGCTAGAAAGTTCAAGCCAGAAATTTCTTCAGGGTT
TGGTCTATCTGATTGGGAACCTGATGGGTTTGGCATTGGCTGTTTACAAGTGCCAGTCTATGGGATTACTGCCTACACAT
GCATCAGATTGGTTAGCCTTCATTGAGCCCCCTGAGAGAATGGAGTTCAGTGGTGGAGGATTACTTCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 14 .72 RPM |
| SRP017611_kidney | 66 .29 RPM |
| SRP017611_brain | 110 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005576 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000008407 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000001688 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000001736 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004615 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000003864 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000009190 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000003824 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000005719 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000516 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_395 | 59.88 | 92.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_719 | 83.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_817 | 77.01 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ocun_1686 | 64.52 | 67.21 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000006160 retrocopies