Parental gene:

ARPC2, ENSOCUG00000005516

Aliases:None
Description:actin related protein 2/3 complex, subunit 2, 34kDa [Source:HGNC Symbol;Acc:705]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:7:159575159..159605172(+)


>ENSOCUG00000005516
ATGATCCTGCTGGAGGTGAACAACCGCATCATCGAGGAGACGCTCGCTCTCAAGTTCGAGAACGCGGCCGCCGGAAACAA
ACCAGAAGCAGTAGAAGTAACCTTTGCAGATTTTGATGGAGTCCTCTATCATATTTCAAATCCTAATGGAGACAAAACAA
AGGTGATGGTCAGTATTTCTTTGAAATTCTACAAAGAACTTCAGGCACATGGTGCTGACGAGTTATTAAAAAGGGTGTAC
GGGAGTTTCTTGGTGAATCCAGAATCAGGATATAATGTCTCTTTGCTATATGACCTTGAGAATCTGCCTGCATCCAAGGA
TTCCATTGTACATCAAGCTGGCATGTTGAAGCGGAACTGTTTTGCCTCTGTCTTTGAGAAATACTTCCAGTTCCAAGAAG
AAGGAAAAGAAGGCGAGAACAGGGCAGTTATCCATTATAGGGATGATGAGACCATGTATGTTGAGTCTAAAAAGGACAGA
GTCACCGTAGTCTTCAGCACCGTGTTTAAGGATGACGATGACGTGGTCATTGGAAAGGTGTTCATGCAGGAGTTCAAAGA
AGGACGCAGAGCCAGTCACACAGCCCCCCAGGTCCTCTTTAGCCACAGGGAACCTCCTCTGGAGCTGAAAGACACGGATG
CTGCTGTGGGCGACAACATCGGCTACATCACCTTCGTGCTGTTCCCTCGCCACACCAACGCCAGTGCCCGAGATAACACC
ATCAACCTGATCCACACGTTCCGGGACTACCTGCACTACCACATCAAGTGCTCTAAGGCCTATATTCACACACGTATGCG
GGCAAAAACGTCTGACTTCCTCAAGGTGCTGAACCGTGCGCGCCCAGATGCTGAGAAGAAAGAAATGAAAACAATCACGG
GGAAGACGTTTTCATCCCGCTAA

Library Parental gene expression (RPM)
SRP017611_liver 47 .94 RPM
SRP017611_kidney 126 .90 RPM
SRP017611_brain 134 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003197 ortholog_one2many 2 retrogenes
retro_amel_1771, retro_amel_1846,
Canis familiaris ENSCAFG00000014618 ortholog_one2one 1 retrogene
retro_cfam_513,
Choloepus hoffmanni ENSCHOG00000010564 ortholog_one2one 5 retrogenes
retro_chof_1845, retro_chof_2103, retro_chof_2226, retro_chof_2227, retro_chof_473,
Dasypus novemcinctus ENSDNOG00000006037 ortholog_one2many 1 retrogene
retro_dnov_5,
Dipodomys ordii ENSDORG00000016107 ortholog_one2one 1 retrogene
retro_dord_624,
Felis catus ENSFCAG00000002370 ortholog_one2many 1 retrogene
retro_fcat_732,
Loxodonta africana ENSLAFG00000007414 ortholog_one2one 1 retrogene
retro_lafr_593,
Myotis lucifugus ENSMLUG00000004161 ortholog_one2many 1 retrogene
retro_mluc_390,
Mustela putorius furo ENSMPUG00000016512 ortholog_one2many 1 retrogene
retro_mputfur_1294,
Mus musculus ENSMUSG00000006304 ortholog_one2one 1 retrogene
retro_mmus_1556,
Pteropus vampyrus ENSPVAG00000017133 ortholog_one2one 1 retrogene
retro_pvam_1216,
Sorex araneus ENSSARG00000003326 ortholog_one2one 1 retrogene
retro_sara_283,
Tarsius syrichta ENSTSYG00000001037 ortholog_one2one 1 retrogene
retro_tsyr_557,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_483 72.57 56.67
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Download FASTA sequences of all ENSOCUG00000005516 retrocopies