Parental gene: | CD2AP, ENSOCUG00000005026 |
| Aliases: | None |
| Description: | CD2-associated protein [Source:HGNC Symbol;Acc:14258] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 12:36818878..36951978(+) |
>ENSOCUG00000005026
ATGGTTGACTATATTGTGGAGTATGACTATGATGCTGTCCATGATGATGAATTAACTATTCGAGTTGGGGAAATCATCAG
AAATGTGAAAAAACTACAGGAGGAAGGATGGCTAGAAGGAGAACTAAATGGGAGAAGAGGAATGTTCCCTGATAATTTTG
TTAAGGAAATTAAAAGAGAGGCAGAATCCAAGGATGACAATTTGCCCATAAAACGAGAAAGGCATGGGAATGTAGCAAGT
CTTGTACAACGAATAAGCACCTATGGGCTTCCAGCTGGAGGAATTCAGCCACACCCTCAAACCAAAAACATTAAGAAAAA
GACCAAGAAGCGTCAGTGTAAAGTTCTTTTTGAATACATTCCACAAAATGAGGATGAACTGGAGCTAAAAGTGGGCGATA
TTATTGATATTAATGAAGAGGTAGAAGAAGGCTGGTGGAGTGGAACCCTGAACAACAAGTCGGGACTGTTTCCCTCAAAT
TTTGTGAAAGAACTAGAGGTAACAGATGATGGTGAAACTCATGAAGCCCAGGAGGATTCAGAAACTGTTTTGACTGGGTC
TACCTCACCTTTACCCTCTCCGGGAAATGGGAATGAAGCTGCACCTGGATCAATTACACAGCCAAAGAAAATTCGAGGAA
TTGGATTTGGAGATATTTTTAAAGAAGGCTCTGTGAAACTTAGGACAAGAACATCCAGTAGTGAAACAGAAGAGAAAAAA
ACAGAAAAGCCTTTAGTCTTACAGCCAATAGGATCCAAAACTCCAAGTGTAGAGATAAAAACAGATACTGAAGGTAAAAT
AAAAGCAAAGGAATATTGTAGAACATTATTTGCCTATGAAGGTACTAATGAAGATGAACTTACATTTAAAGAGGGGGAGA
TAATCCATTTGATAAGTAAGGAGACTGGAGAAACTGGCTGGTGGAAAGGTGAACTTAATGGTAAAGAAGGAGTATTTCCA
GACAATTTTGCTGTTCAAATAAGTGAATTGGATAAAGATTTCCCAAAACCAAAGAAACCACCACCTCCTATTAAGGGTCC
AGCTCCAAAGCCTGACTTGATTGCTGCGGAGAAGAAGTATTTTCTGTTAAAGCCTGAAGAAAAAGAATCATCAGATGAAA
AATCAGTGCTGGAACAAAAACCTTCTAAACCAGCTGCTCCACAAGTCCCACCCAAGAAACCCACTCCACCCACCAAAGCC
AATAATATATTGAGATCCTCTGGAACAACGTACCCAAAGCGACCTGAAAAACCAGTTCCCCCACCACCTCCTATAGCCAA
GATTAATGGGGAAGTTTCTATCATTTCATCAAAGTTTGAAACTGAGCCCGTATCAAAACCAAAGTTAGATTCTGAACAGT
TGCCACTTAGACCAAAATCAGTAGACCTTGACTCATTTACAGTAAGGAGCTCTAAAGAAACAGATGTTGTAAATTTTGAT
GACATAGCTTCCTCAGAAAACTTGCTACATCTCACAGCAAATAGACCTAAGATGCCTGGAAGAAGGCTGCCTGGCCGCTT
CAATGGTGGACATTCTCCAACTCAGAGCCCAGAGAAAAATTTGAAGTTACCAAAGGAAGAAGATAGTGCCAATGTAAAGC
CATCTGAATTGAAAAAGGATACATCCTACTCTCCAAAGCCATCTGTGTATACAACTTCAAGTGCATCTAAAGCAAATTCA
GCTGCATTCTTAACTCCATTAGAAACCAAAGCTAAACTAGAGGCAGATGATGGGAAAAAAAATTCCCTGGATGAACTCAG
AGCCCAGATTATTGAATTGCTGTGTATTGTAGAAGCGCTAAAGAAGGATCATGGGAAAGAACTGGAAAAACTGAGAAAAG
ATTTGGAAGAAGAGAAGGCTCTTAGGAGTAATCTAGAGATGGAAATAGAGAAGCTGAAGAAAACTGTCCTGTCTTCTTGA
ATGGTTGACTATATTGTGGAGTATGACTATGATGCTGTCCATGATGATGAATTAACTATTCGAGTTGGGGAAATCATCAG
AAATGTGAAAAAACTACAGGAGGAAGGATGGCTAGAAGGAGAACTAAATGGGAGAAGAGGAATGTTCCCTGATAATTTTG
TTAAGGAAATTAAAAGAGAGGCAGAATCCAAGGATGACAATTTGCCCATAAAACGAGAAAGGCATGGGAATGTAGCAAGT
CTTGTACAACGAATAAGCACCTATGGGCTTCCAGCTGGAGGAATTCAGCCACACCCTCAAACCAAAAACATTAAGAAAAA
GACCAAGAAGCGTCAGTGTAAAGTTCTTTTTGAATACATTCCACAAAATGAGGATGAACTGGAGCTAAAAGTGGGCGATA
TTATTGATATTAATGAAGAGGTAGAAGAAGGCTGGTGGAGTGGAACCCTGAACAACAAGTCGGGACTGTTTCCCTCAAAT
TTTGTGAAAGAACTAGAGGTAACAGATGATGGTGAAACTCATGAAGCCCAGGAGGATTCAGAAACTGTTTTGACTGGGTC
TACCTCACCTTTACCCTCTCCGGGAAATGGGAATGAAGCTGCACCTGGATCAATTACACAGCCAAAGAAAATTCGAGGAA
TTGGATTTGGAGATATTTTTAAAGAAGGCTCTGTGAAACTTAGGACAAGAACATCCAGTAGTGAAACAGAAGAGAAAAAA
ACAGAAAAGCCTTTAGTCTTACAGCCAATAGGATCCAAAACTCCAAGTGTAGAGATAAAAACAGATACTGAAGGTAAAAT
AAAAGCAAAGGAATATTGTAGAACATTATTTGCCTATGAAGGTACTAATGAAGATGAACTTACATTTAAAGAGGGGGAGA
TAATCCATTTGATAAGTAAGGAGACTGGAGAAACTGGCTGGTGGAAAGGTGAACTTAATGGTAAAGAAGGAGTATTTCCA
GACAATTTTGCTGTTCAAATAAGTGAATTGGATAAAGATTTCCCAAAACCAAAGAAACCACCACCTCCTATTAAGGGTCC
AGCTCCAAAGCCTGACTTGATTGCTGCGGAGAAGAAGTATTTTCTGTTAAAGCCTGAAGAAAAAGAATCATCAGATGAAA
AATCAGTGCTGGAACAAAAACCTTCTAAACCAGCTGCTCCACAAGTCCCACCCAAGAAACCCACTCCACCCACCAAAGCC
AATAATATATTGAGATCCTCTGGAACAACGTACCCAAAGCGACCTGAAAAACCAGTTCCCCCACCACCTCCTATAGCCAA
GATTAATGGGGAAGTTTCTATCATTTCATCAAAGTTTGAAACTGAGCCCGTATCAAAACCAAAGTTAGATTCTGAACAGT
TGCCACTTAGACCAAAATCAGTAGACCTTGACTCATTTACAGTAAGGAGCTCTAAAGAAACAGATGTTGTAAATTTTGAT
GACATAGCTTCCTCAGAAAACTTGCTACATCTCACAGCAAATAGACCTAAGATGCCTGGAAGAAGGCTGCCTGGCCGCTT
CAATGGTGGACATTCTCCAACTCAGAGCCCAGAGAAAAATTTGAAGTTACCAAAGGAAGAAGATAGTGCCAATGTAAAGC
CATCTGAATTGAAAAAGGATACATCCTACTCTCCAAAGCCATCTGTGTATACAACTTCAAGTGCATCTAAAGCAAATTCA
GCTGCATTCTTAACTCCATTAGAAACCAAAGCTAAACTAGAGGCAGATGATGGGAAAAAAAATTCCCTGGATGAACTCAG
AGCCCAGATTATTGAATTGCTGTGTATTGTAGAAGCGCTAAAGAAGGATCATGGGAAAGAACTGGAAAAACTGAGAAAAG
ATTTGGAAGAAGAGAAGGCTCTTAGGAGTAATCTAGAGATGGAAATAGAGAAGCTGAAGAAAACTGTCCTGTCTTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .86 RPM |
| SRP017611_kidney | 28 .18 RPM |
| SRP017611_brain | 4 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000009776 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000061665 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000011987 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_307 | 98.71 | 60.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000005026 retrocopies