Parental gene:

SNX10, ENSOCUG00000004744

Aliases:None
Description:sorting nexin 10 [Source:HGNC Symbol;Acc:14974]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:10:11161760..11176437(+)


>ENSOCUG00000004744
GTCTTTGTCGTGATGCCCTTACAGGAGTTCGTGAGCGTCTGGGTCCGCGACCCCAGGATCCAGAAGGAGGACTTCTGGCA
TTCTTACATCGACTATGAGATCTGCATTCACGCCACTGCCAGGACCGACTGTGTGTTTAGGTTTCGTTTCAGTTTAACTT
TCAAGTTCACACCAGAAGACACGTGTGAGGCTGTAAGAGTGCCGGAACTTCCATCTAAAAACCTGTTCTTCAACATGAAC
AATCGGCAGCACGTGGATCAGCGTCGTCAAGGGCTGGAGGATTTCCTCCGAAAAGTCCTGCAGAACGCACTGCTGCTGTC
CGACAGCAGCCTGCACCTCTTCCTGCAGAGCCACCTGGCCGCCGCCGACATCGACGCCTGCGTGTCCGGGCAGACCAAGT
ACTCGGTGGAGGAGGCCATCCACAAGTTCGCGCTCATGAACCGACGCTTCCCCGAGGAGGACGAGGAAGGGAAAAAGGAC
CACGACGCAGACTACGACTCGGAGAGTTCATCCTCTGGGCTGGGACACAGCAGTGATGACAGCAGCTCACACGGATGTAA
AATCAGTCCAGATCCCCAGGGGTCCTGA

Library Parental gene expression (RPM)
SRP017611_liver 14 .18 RPM
SRP017611_kidney 11 .96 RPM
SRP017611_brain 64 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000291 ortholog_one2one 2 retrogenes
retro_chof_1983, retro_chof_445,
Myotis lucifugus ENSMLUG00000000285 ortholog_one2one 1 retrogene
retro_mluc_488,
Mus musculus ENSMUSG00000038301 ortholog_one2one 1 retrogene
retro_mmus_2736,
Oryctolagus cuniculus ENSOCUG00000005858 within_species_paralog 2 retrogenes
retro_ocun_1022, retro_ocun_750,
Oryctolagus cuniculus ENSOCUG00000014919 within_species_paralog 1 retrogene
retro_ocun_1286,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_918 67.69 66.15
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Download FASTA sequences of all ENSOCUG00000004744 retrocopies