Parental gene: | ACTC1, ENSOCUG00000004074 |
| Aliases: | None |
| Description: | actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:143] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 17:37529471..37536002(+) |
>ENSOCUG00000004074
ATGTGTGACGACGAGGAGACCACCGCCCTGGTGTGCGACAACGGCTCTGGGCTGGTGAAGGCCGGCTTTGCGGGCGATGA
CGCGCCCCGCGCTGTCTTCCCTTCCATCGTGGGCCGCCCGCGTCACCAGGGAGTCATGGTGGGTATGGGTCAGAAGGACT
CCTATGTAGGTGATGAAGCACAGAGCAAGCGAGGTATCCTGACTCTGAAGTACCCAATCGAGCATGGCATCATCACCAAC
TGGGATGACATGGAGAAGATCTGGCACCACACATTCTACAATGAGCTCCGTGTGGCCCCAGAGGAGCACCCAACCCTGCT
CACGGAGGCCCCACTGAACCCCAAAGCCAACCGCGAGAAGATGACTCAGATCATGTTTGAGACCTTCAATGTCCCTGCCA
TGTATGTGGCCATCCAGGCAGTGCTGTCCCTGTATGCTTCTGGCCGTACCACAGGCATTGTTCTGGACTCTGGGGATGGT
GTAACTCACAACGTCCCCATCTATGAGGGCTATGCTTTGCCCCATGCCATCATGCGTTTGGATCTGGCTGGTCGGGATCT
CACTGACTATCTCATGAAGATCCTCACGGAGCGTGGCTACTCTTTTGTCACCACTGCTGAACGTGAAATTGTCCGTGACA
TTAAAGAGAAGCTGTGTTATGTTGCCCTGGATTTTGAGAATGAGATGGCCACAGCTGCCTCCTCCTCCTCCCTGGAGAAG
AGCTATGAACTGCCTGACGGCCAAGTCATCACTATTGGCAACGAGCGCTTCCGCTGCCCTGAGACACTCTTCCAGCCCTC
CTTCATTGGTATGGAATCTGCTGGCATCCATGAAACTACTTACAATAGCATCATGAAGTGTGACATTGACATTCGTAAAG
ACCTGTATGCCAACAATGTCTTATCTGGAGGTACCACCATGTACCCTGGTATTGCTGATCGAATGCAAAAGGAAATCACT
GCCTTGGCTCCCAGCACCATGAAGATTAAGATTATTGCTCCCCCCGAGCGTAAATACTCTGTCTGGATTGGGGGCTCTAT
CCTGGCTTCTCTGTCCACCTTCCAGCAGATGTGGATAAGCAAGCAAGAGTATGATGAGGCAGGACCATCCATTGTCCACC
GCAAATGCTTCTAA
ATGTGTGACGACGAGGAGACCACCGCCCTGGTGTGCGACAACGGCTCTGGGCTGGTGAAGGCCGGCTTTGCGGGCGATGA
CGCGCCCCGCGCTGTCTTCCCTTCCATCGTGGGCCGCCCGCGTCACCAGGGAGTCATGGTGGGTATGGGTCAGAAGGACT
CCTATGTAGGTGATGAAGCACAGAGCAAGCGAGGTATCCTGACTCTGAAGTACCCAATCGAGCATGGCATCATCACCAAC
TGGGATGACATGGAGAAGATCTGGCACCACACATTCTACAATGAGCTCCGTGTGGCCCCAGAGGAGCACCCAACCCTGCT
CACGGAGGCCCCACTGAACCCCAAAGCCAACCGCGAGAAGATGACTCAGATCATGTTTGAGACCTTCAATGTCCCTGCCA
TGTATGTGGCCATCCAGGCAGTGCTGTCCCTGTATGCTTCTGGCCGTACCACAGGCATTGTTCTGGACTCTGGGGATGGT
GTAACTCACAACGTCCCCATCTATGAGGGCTATGCTTTGCCCCATGCCATCATGCGTTTGGATCTGGCTGGTCGGGATCT
CACTGACTATCTCATGAAGATCCTCACGGAGCGTGGCTACTCTTTTGTCACCACTGCTGAACGTGAAATTGTCCGTGACA
TTAAAGAGAAGCTGTGTTATGTTGCCCTGGATTTTGAGAATGAGATGGCCACAGCTGCCTCCTCCTCCTCCCTGGAGAAG
AGCTATGAACTGCCTGACGGCCAAGTCATCACTATTGGCAACGAGCGCTTCCGCTGCCCTGAGACACTCTTCCAGCCCTC
CTTCATTGGTATGGAATCTGCTGGCATCCATGAAACTACTTACAATAGCATCATGAAGTGTGACATTGACATTCGTAAAG
ACCTGTATGCCAACAATGTCTTATCTGGAGGTACCACCATGTACCCTGGTATTGCTGATCGAATGCAAAAGGAAATCACT
GCCTTGGCTCCCAGCACCATGAAGATTAAGATTATTGCTCCCCCCGAGCGTAAATACTCTGTCTGGATTGGGGGCTCTAT
CCTGGCTTCTCTGTCCACCTTCCAGCAGATGTGGATAAGCAAGCAAGAGTATGATGAGGCAGGACCATCCATTGTCCACC
GCAAATGCTTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .23 RPM |
| SRP017611_kidney | 0 .00 RPM |
| SRP017611_brain | 4 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Latimeria chalumnae | ENSLACG00000011801 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005867 | other_paralog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008193 | other_paralog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000006318 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_38 | 88.24 | 99.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000004074 retrocopies