Parental gene: | ENSOCUG00000003923 |
| Aliases: | None |
| Description: | None |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 9:7833949..7856866(+) |
>ENSOCUG00000003923
ATGGCTCGAAATGCAGAAAAGGCCATGACGGCCTTAGCAAGGTTTCGCCAAGCCCAGCTGGAAGAGGGAAAAGTGAAGGA
ACGAAGGCCCTTCCTTGCTTCGGAATGTACAGAGCTGCCCAAGGCTGAGAAGTGGAGACGGCAGATCATTGGAGAGATCT
CTAAAAAAGTGGCACAGATTCAGAATGCTGGTTTAGGTGAATTCCGAATTCGTGACCTGAATGATGAAATTAACAAGCTG
CTGAGAGAGAAAGGACACTGGGAGGTCCGAGTGAAGGAGTTGGGTGGTCCTGATTATGGGAAAGTTGGCCCTAAAATGCT
GGATCATGAAGGGAAAGAAGTCCCGGGAAACCGAGGTTACAAGTACTTTGGAGCAGCAAAAGATTTGCCTGGTGTTAGAG
AGTTGTTTGAAAAAGAACCTCTCCCTCCTCCCAGGAAGACACGTGCTGAGCTCATGAAAGCGATCGATTTTGAGTACTAT
GGTTACCTGGATGAAGACGATGGAGTTATTGTGCCTTTGGAACAGGAATACGAAAAGAAACTCAGAGCCGAGCTGGTAGA
GAAGTGGAAGGCAGAGAAGGAGGCCCGGCTGGCAAGAGGAGAAAAAGAAGAGGAGGAGGAAGAGGAGGAAGAGATCAACA
TCTACGCTGTCACCGAGGAGGAGTCTGACGAGGAAGGCAGCCAGGAGAAGGGAGGGGAGGACGGGCAGCAGAAGTTCATT
GCTCACGTCCCAGTGCCGTCGCAACAGGAGATTGAGGAGGCGCTCGTGCGAAGGAAGAAGATGGAGCTCCTGCAGAAGTA
CGCGAGTGAGACTCTGCAGGCACAGAGTGAAGAAGCCAAAAGGCTCCTGGGATATTAG
ATGGCTCGAAATGCAGAAAAGGCCATGACGGCCTTAGCAAGGTTTCGCCAAGCCCAGCTGGAAGAGGGAAAAGTGAAGGA
ACGAAGGCCCTTCCTTGCTTCGGAATGTACAGAGCTGCCCAAGGCTGAGAAGTGGAGACGGCAGATCATTGGAGAGATCT
CTAAAAAAGTGGCACAGATTCAGAATGCTGGTTTAGGTGAATTCCGAATTCGTGACCTGAATGATGAAATTAACAAGCTG
CTGAGAGAGAAAGGACACTGGGAGGTCCGAGTGAAGGAGTTGGGTGGTCCTGATTATGGGAAAGTTGGCCCTAAAATGCT
GGATCATGAAGGGAAAGAAGTCCCGGGAAACCGAGGTTACAAGTACTTTGGAGCAGCAAAAGATTTGCCTGGTGTTAGAG
AGTTGTTTGAAAAAGAACCTCTCCCTCCTCCCAGGAAGACACGTGCTGAGCTCATGAAAGCGATCGATTTTGAGTACTAT
GGTTACCTGGATGAAGACGATGGAGTTATTGTGCCTTTGGAACAGGAATACGAAAAGAAACTCAGAGCCGAGCTGGTAGA
GAAGTGGAAGGCAGAGAAGGAGGCCCGGCTGGCAAGAGGAGAAAAAGAAGAGGAGGAGGAAGAGGAGGAAGAGATCAACA
TCTACGCTGTCACCGAGGAGGAGTCTGACGAGGAAGGCAGCCAGGAGAAGGGAGGGGAGGACGGGCAGCAGAAGTTCATT
GCTCACGTCCCAGTGCCGTCGCAACAGGAGATTGAGGAGGCGCTCGTGCGAAGGAAGAAGATGGAGCTCCTGCAGAAGTA
CGCGAGTGAGACTCTGCAGGCACAGAGTGAAGAAGCCAAAAGGCTCCTGGGATATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 17 .03 RPM |
| SRP017611_kidney | 35 .07 RPM |
| SRP017611_brain | 35 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000006886 | ortholog_one2one | 1 retrogene | |
| Ficedula albicollis | ENSFALG00000000023 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000004015 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011804 | ortholog_one2one | 1 retrogene | |
| Taeniopygia guttata | ENSTGUG00000003998 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1485 | 67.52 | 54.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000003923 retrocopies