Parental gene: | UBLCP1, ENSOCUG00000002224 |
| Aliases: | None |
| Description: | ubiquitin-like domain containing CTD phosphatase 1 [Source:HGNC Symbol;Acc:28110] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:40649623..40671070(+) |
>ENSOCUG00000002224
ATGGCTCTTCCTATCATTGTGAAATGGGGTGGACAGGAATATTCCGTGACTACGCTTTCAGAAGATGATACTGTGCTGGA
CCTCAAGCAGTTTCTCAAGACCCTTACAGGGGTGCTGCCAGAACGCCAGAAGTTGCTGGGACTCAAAGTTAAAGGCAAAC
CTGCAGAAAATGATGTTAAGCTTGGAGCTCTCAAACTGAAACCAAATACTAAAATCATGATGATGGGAACTCGTGAGGAG
AGCTTGGAAGATGTCTTGGGTCCACCCCCTGACAATGATGATGTTGTTAACGATTTTGATATTGAAGATGAAGTTGTTGA
AGTAGAAAATAGGGAAGAAAACCTCCTAAAAATTTCTCGCAGAGTGAAAGAGTACAAAGTGGAAATTTTGAATCCTCCTA
GGGAAGGGAAAAAGCTTTTGGTACTAGATGTTGATTACACATTATTTGACCATAGGTCTTGTGCTGAGACTGGGGTGGAA
TTAATGAGGCCATATCTTCATGAATTCCTCACATCTGCATATGAAGATTATGACATTGTTATTTGGTCTGCAACAAATAT
GAAGTGGATTGAAGCTAAAATGAAAGAGCTAGGAGTGAGCACAAATGCAAATTATAAGATTACCTTCATGTTGGACAGTG
CTGCTATGATAACAGTGCATACTCCCAGGAGAGGATTAATAGATGTAAAGCCTCTTGGTGTTATATGGGGAAAGTTTTCG
GAATTTTACAGCAAGAAAAATACCATTATGTTTGATGACATAGGAAGAAATTTTCTGATGAACCCACAGAATGGACTAAA
GATAAGGCCCTTTATGAAAGCACACCTAAATCGAGATAAAGACAAAGAACTTTTAAAATTAACTCAGTACCTCAAGGAAA
TAGCAAAATTAGATGACTTTTTGGAGTTAAATCACAAATATTGGGAAAGGTATCTCTCAAAGAAGCAAGGACAATAG
ATGGCTCTTCCTATCATTGTGAAATGGGGTGGACAGGAATATTCCGTGACTACGCTTTCAGAAGATGATACTGTGCTGGA
CCTCAAGCAGTTTCTCAAGACCCTTACAGGGGTGCTGCCAGAACGCCAGAAGTTGCTGGGACTCAAAGTTAAAGGCAAAC
CTGCAGAAAATGATGTTAAGCTTGGAGCTCTCAAACTGAAACCAAATACTAAAATCATGATGATGGGAACTCGTGAGGAG
AGCTTGGAAGATGTCTTGGGTCCACCCCCTGACAATGATGATGTTGTTAACGATTTTGATATTGAAGATGAAGTTGTTGA
AGTAGAAAATAGGGAAGAAAACCTCCTAAAAATTTCTCGCAGAGTGAAAGAGTACAAAGTGGAAATTTTGAATCCTCCTA
GGGAAGGGAAAAAGCTTTTGGTACTAGATGTTGATTACACATTATTTGACCATAGGTCTTGTGCTGAGACTGGGGTGGAA
TTAATGAGGCCATATCTTCATGAATTCCTCACATCTGCATATGAAGATTATGACATTGTTATTTGGTCTGCAACAAATAT
GAAGTGGATTGAAGCTAAAATGAAAGAGCTAGGAGTGAGCACAAATGCAAATTATAAGATTACCTTCATGTTGGACAGTG
CTGCTATGATAACAGTGCATACTCCCAGGAGAGGATTAATAGATGTAAAGCCTCTTGGTGTTATATGGGGAAAGTTTTCG
GAATTTTACAGCAAGAAAAATACCATTATGTTTGATGACATAGGAAGAAATTTTCTGATGAACCCACAGAATGGACTAAA
GATAAGGCCCTTTATGAAAGCACACCTAAATCGAGATAAAGACAAAGAACTTTTAAAATTAACTCAGTACCTCAAGGAAA
TAGCAAAATTAGATGACTTTTTGGAGTTAAATCACAAATATTGGGAAAGGTATCTCTCAAAGAAGCAAGGACAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 10 .10 RPM |
| SRP017611_kidney | 33 .45 RPM |
| SRP017611_brain | 42 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007691 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000170 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000010060 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006359 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008063 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013396 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000041231 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008983 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000005876 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1036 | 93.40 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000002224 retrocopies